RNA id: TU99272



Basic Information


Item Value
RNA id TU99272
length 296
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G73622
representative True

Chromosome Information


Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 14756899 ~ 14757248 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


cacacacacacacacacacacacaggccgtACACTCGGTCTGCGGACGTGGGAATGTCACTGTTTGCCGTTTTTCGGGGCCCCGCGCGCACTTTCAACTACCAACCGTCACTCAACACCGACAGCGCGCGAGAAGGAAACACTACACACGAACTCTAGCAAACTATTCTTATCGATCAGAAGATACCAGAGAGAGACACCGCTTCACTCCCACTGTAACAtctctttaaaggagaactcgggtgtaaaattgactttgggagtagtaaaacagcagctttccggGATCCAGTTATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU99266 lncRNA downstream 8241 14745170 ~ 14748658 (-) True G73617
TU99251 lncRNA downstream 80041 14675881 ~ 14676858 (-) True G73606
TU99167 lncRNA downstream 150939 14597951 ~ 14605960 (-) False G73540
TU99170 lncRNA downstream 150939 14598454 ~ 14605960 (-) True G73540
TU99124 lncRNA downstream 288758 14467622 ~ 14468141 (-) True G73509
TU99250 lncRNA upstream 40107 14797355 ~ 14800633 (-) True G73605
TU99301 lncRNA upstream 46983 14804231 ~ 14805502 (-) True G73639
TU99307 lncRNA upstream 61254 14818502 ~ 14818812 (-) True G73642
TU99308 lncRNA upstream 62228 14819476 ~ 14819763 (-) True G73643
TU99309 lncRNA upstream 62982 14820230 ~ 14820476 (-) True G73644
XM_007228182.3 mRNA downstream 23646 14718554 ~ 14733253 (-) True prkar2b
XM_007228180.3 mRNA downstream 39208 14709058 ~ 14717691 (-) False hbp1
XM_007228179.3 mRNA downstream 41339 14709058 ~ 14715560 (-) True hbp1
XM_022671917.1 mRNA downstream 66792 14687689 ~ 14690107 (-) True LOC111193055
XM_007228172.3 mRNA downstream 107648 14640001 ~ 14649251 (-) True gpr22
XM_007228192.3 mRNA upstream 65970 14823218 ~ 14826889 (-) True mphosph6
XM_007228194.3 mRNA upstream 70156 14827404 ~ 14831477 (-) True snx20
XM_022672176.1 mRNA upstream 92334 14849582 ~ 14857596 (-) False LOC103033621
XM_007228195.3 mRNA upstream 92334 14849582 ~ 14857595 (-) True LOC103033621
XM_007228197.3 mRNA upstream 111684 14868932 ~ 14889755 (-) False rbl2
TU99163 other downstream 211461 14542209 ~ 14545438 (-) False LOC103025073
TU98709 other downstream 2135543 12610834 ~ 12621356 (-) True G73172
TU98667 other downstream 2191933 12564348 ~ 12564966 (-) False fbxo31
TU98668 other downstream 2192025 12564348 ~ 12564874 (-) False fbxo31
TU98666 other downstream 2192101 12564348 ~ 12564798 (-) False fbxo31
XR_002650248.1 other upstream 1004516 15761764 ~ 15778423 (-) False LOC103046265
TU100463 other upstream 3119778 17877026 ~ 17883786 (-) False nrg4
TU100498 other upstream 3225499 17982747 ~ 18029747 (-) True G74591
TU100745 other upstream 4181926 18939174 ~ 18940464 (-) True G74791
TU100809 other upstream 4313690 19070938 ~ 19072888 (-) True G74838

Expression Profile