Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007228041.3 |
| length | 1253 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | thg1l |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 9974224 ~ 9977824 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006400 | tRNA modification | biological_process |
| GO:0008193 | tRNA guanylyltransferase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| id | description |
|---|---|
| K10761 | THG1; tRNA(His) guanylyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU97903 | lncRNA | upstream | 4182 | 9968567 ~ 9970042 (+) | False | LOC103043718 |
| TU97793 | lncRNA | upstream | 200625 | 9773199 ~ 9773599 (+) | True | G72514 |
| TU97782 | lncRNA | upstream | 252342 | 9720971 ~ 9721882 (+) | True | G72503 |
| TU97779 | lncRNA | upstream | 256309 | 9717673 ~ 9717915 (+) | True | G72500 |
| TU97773 | lncRNA | upstream | 264010 | 9708437 ~ 9710214 (+) | True | G72496 |
| TU97912 | lncRNA | downstream | 151 | 9977975 ~ 9978422 (+) | True | G72606 |
| TU97918 | lncRNA | downstream | 50659 | 10028483 ~ 10028846 (+) | True | G72612 |
| TU97923 | lncRNA | downstream | 79659 | 10057483 ~ 10057818 (+) | True | G72615 |
| TU97925 | lncRNA | downstream | 80861 | 10058685 ~ 10058886 (+) | True | G72617 |
| XR_002650238.1 | lncRNA | downstream | 119435 | 10097259 ~ 10099145 (+) | True | LOC111193092 |
| XM_007228038.3 | mRNA | upstream | 4182 | 9968506 ~ 9970042 (+) | True | LOC103043718 |
| XM_022672099.1 | mRNA | upstream | 16696 | 9910406 ~ 9957528 (+) | True | LOC103044029 |
| XM_007228043.3 | mRNA | downstream | 87592 | 10065416 ~ 10073101 (+) | True | irf7 |
| XM_007228044.3 | mRNA | downstream | 87593 | 10065417 ~ 10073101 (+) | False | irf7 |
| XM_007228055.3 | mRNA | downstream | 207913 | 10185737 ~ 10206122 (+) | True | hras |
| XM_007228054.3 | mRNA | downstream | 229885 | 10207709 ~ 10212496 (+) | True | LOC103047796 |
| XM_007228053.3 | mRNA | downstream | 234739 | 10212563 ~ 10221827 (+) | True | tsg101 |
| TU97487 | other | upstream | 824805 | 9142899 ~ 9149419 (+) | True | G72281 |
| TU96877 | other | upstream | 3088683 | 6881587 ~ 6885541 (+) | True | G71788 |
| TU96736 | other | upstream | 3435430 | 6525641 ~ 6538794 (+) | True | G71682 |
| trnaa-agc_15 | other | upstream | 3936476 | 6037676 ~ 6037748 (+) | True | trnaa-agc_15 |
| trnaa-agc_14 | other | upstream | 3937350 | 6036802 ~ 6036874 (+) | True | trnaa-agc_14 |
| TU97933 | other | downstream | 100755 | 10078579 ~ 10082140 (+) | True | G72621 |
| trnar-ucg_4 | other | downstream | 2625528 | 12603352 ~ 12603424 (+) | True | trnar-ucg_4 |
| XR_002650241.1 | other | downstream | 2893660 | 12871484 ~ 12897931 (+) | False | LOC103043719 |
| TU99159 | other | downstream | 4671005 | 14648829 ~ 14649551 (+) | True | G73533 |
| XR_002650242.1 | other | downstream | 4913710 | 14891534 ~ 14921003 (+) | False | rpgrip1l |
