Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022672133.1 |
| length | 1182 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 14 |
| gene id | LOC103031503 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 11944425 ~ 11953789 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006942 | regulation of striated muscle contraction | biological_process |
| GO:0045214 | sarcomere organization | biological_process |
| GO:0005861 | troponin complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98410 | lncRNA | downstream | 209579 | 11734144 ~ 11734846 (-) | True | G72974 |
| TU98401 | lncRNA | downstream | 211276 | 11694678 ~ 11733149 (-) | True | G72967 |
| TU98284 | lncRNA | downstream | 712747 | 11231179 ~ 11231678 (-) | True | G72881 |
| TU98281 | lncRNA | downstream | 718471 | 11224779 ~ 11225954 (-) | True | LOC111193093 |
| TU98254 | lncRNA | downstream | 812152 | 11079088 ~ 11132273 (-) | True | G72857 |
| TU98475 | lncRNA | upstream | 94837 | 12048626 ~ 12050542 (-) | True | LOC111193053 |
| TU98496 | lncRNA | upstream | 171747 | 12125536 ~ 12126823 (-) | True | G73030 |
| TU98587 | lncRNA | upstream | 240784 | 12194573 ~ 12196578 (-) | True | G73098 |
| TU98588 | lncRNA | upstream | 240784 | 12194573 ~ 12196578 (-) | False | G73098 |
| TU98619 | lncRNA | upstream | 549074 | 12502863 ~ 12539230 (-) | True | G73119 |
| XM_022672129.1 | mRNA | downstream | 109685 | 11817026 ~ 11834740 (-) | True | ush1c |
| XM_022672128.1 | mRNA | downstream | 109685 | 11817439 ~ 11834740 (-) | False | ush1c |
| XM_015600969.2 | mRNA | downstream | 109694 | 11805817 ~ 11834731 (-) | False | ush1c |
| XM_022672126.1 | mRNA | downstream | 140390 | 11739962 ~ 11804035 (-) | False | abcc8 |
| XM_022672124.1 | mRNA | downstream | 140390 | 11739962 ~ 11804035 (-) | True | abcc8 |
| XM_022672136.1 | mRNA | upstream | 3781 | 11957570 ~ 11996201 (-) | False | LOC103031193 |
| XM_022672137.1 | mRNA | upstream | 3781 | 11957570 ~ 11996201 (-) | False | LOC103031193 |
| XM_022672135.1 | mRNA | upstream | 3781 | 11957570 ~ 11996201 (-) | True | LOC103031193 |
| XM_022672138.1 | mRNA | upstream | 11396 | 11965185 ~ 11996201 (-) | False | LOC103031193 |
| XM_007228105.2 | mRNA | upstream | 79500 | 12033289 ~ 12036047 (-) | True | LOC103034366 |
| XR_002650239.1 | other | downstream | 168286 | 11767509 ~ 11776139 (-) | True | LOC111193095 |
| TU98300 | other | downstream | 399202 | 11520887 ~ 11545223 (-) | False | LOC111193052 |
| TU98292 | other | downstream | 399289 | 11521012 ~ 11545136 (-) | False | LOC111193052 |
| TU97707 | other | downstream | 2718866 | 9222692 ~ 9225559 (-) | True | G72453 |
| TU97699 | other | downstream | 2770116 | 9165878 ~ 9174309 (-) | True | G72449 |
| TU98666 | other | upstream | 610559 | 12564348 ~ 12564798 (-) | False | fbxo31 |
| TU98667 | other | upstream | 610559 | 12564348 ~ 12564966 (-) | False | fbxo31 |
| TU98668 | other | upstream | 610559 | 12564348 ~ 12564874 (-) | False | fbxo31 |
| TU98709 | other | upstream | 657045 | 12610834 ~ 12621356 (-) | True | G73172 |
| TU99163 | other | upstream | 2588420 | 14542209 ~ 14545438 (-) | False | LOC103025073 |
