Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022672162.1 |
| length | 1141 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 8 |
| gene id | ehf |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 13662809 ~ 13677076 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K17102 | EHF; ETS homologous factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98910 | lncRNA | upstream | 31920 | 13637016 ~ 13637702 (+) | True | G73337 |
| TU98905 | lncRNA | upstream | 159384 | 13509756 ~ 13510238 (+) | True | G73332 |
| TU98870 | lncRNA | upstream | 431410 | 13237960 ~ 13238212 (+) | True | G73301 |
| TU98867 | lncRNA | upstream | 443667 | 13225671 ~ 13225955 (+) | True | G73298 |
| TU98861 | lncRNA | upstream | 510943 | 13157769 ~ 13158679 (+) | True | G73292 |
| TU98939 | lncRNA | downstream | 91049 | 13768125 ~ 13768360 (+) | True | G73354 |
| TU98947 | lncRNA | downstream | 114254 | 13791330 ~ 13794158 (+) | True | G73361 |
| TU98944 | lncRNA | downstream | 151643 | 13828719 ~ 13830765 (+) | True | G73359 |
| TU98991 | lncRNA | downstream | 245525 | 13922601 ~ 13923296 (+) | True | G73404 |
| TU99013 | lncRNA | downstream | 325996 | 14003072 ~ 14003426 (+) | True | G73416 |
| XM_022672161.1 | mRNA | upstream | 726660 | 12934452 ~ 12942962 (+) | True | rag1 |
| XM_007228140.3 | mRNA | upstream | 760561 | 12897785 ~ 12909061 (+) | False | LOC103044030 |
| XM_022672160.1 | mRNA | upstream | 760561 | 12900385 ~ 12909061 (+) | False | LOC103044030 |
| XM_007228139.3 | mRNA | upstream | 760561 | 12901430 ~ 12909061 (+) | True | LOC103044030 |
| XM_007228138.3 | mRNA | upstream | 773159 | 12871484 ~ 12896463 (+) | True | LOC103043719 |
| XM_007228153.3 | mRNA | downstream | 17352 | 13694428 ~ 13765050 (+) | True | pdhx |
| XM_022671916.1 | mRNA | downstream | 117337 | 13794413 ~ 13828422 (+) | True | cd44 |
| XM_007228159.3 | mRNA | downstream | 331556 | 14008632 ~ 14011720 (+) | True | fjx1 |
| XM_022672166.1 | mRNA | downstream | 400936 | 14078012 ~ 14161299 (+) | True | trim44 |
| XM_022672167.1 | mRNA | downstream | 560963 | 14238039 ~ 14389321 (+) | True | ldlrad3 |
| XR_002650241.1 | other | upstream | 771691 | 12871484 ~ 12897931 (+) | False | LOC103043719 |
| trnar-ucg_4 | other | upstream | 1066198 | 12603352 ~ 12603424 (+) | True | trnar-ucg_4 |
| TU97933 | other | upstream | 3587482 | 10078579 ~ 10082140 (+) | True | G72621 |
| TU97487 | other | upstream | 4520203 | 9142899 ~ 9149419 (+) | True | G72281 |
| TU96877 | other | upstream | 6784081 | 6881587 ~ 6885541 (+) | True | G71788 |
| TU99159 | other | downstream | 971753 | 14648829 ~ 14649551 (+) | True | G73533 |
| XR_002650242.1 | other | downstream | 1214458 | 14891534 ~ 14921003 (+) | False | rpgrip1l |
| TU99974 | other | downstream | 2609600 | 16286676 ~ 16288329 (+) | True | G74169 |
| TU100573 | other | downstream | 4777775 | 18454851 ~ 18455197 (+) | True | G74649 |
| TU100801 | other | downstream | 5405740 | 19082816 ~ 19085556 (+) | True | G74832 |
