RNA id: XM_007235191.2


Basic Information

Item Value
RNA id XM_007235191.2
length 3562
RNA type mRNA
GC content 0.45
exon number 8
gene id adck2
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 25655765 ~ 25661625 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ATCTGATTGTGAACAAGATCAAACATAAACGTTAAACTTGctaaaacactttactgcagTGAGGGTTGAATAATTTTGAACACAATAATCTGAACACAATACCAGTTGTTATTGAAACAAATAACTGTATATTTTGTGATGATGTGGAAACAACTAatcatgtgtttatttattcaaatatacTATATGCATGTTCTTCgtacaataaaaaatgtttatctcCGGAACAAAGGGCAGAGTGTGTTTCTGCACGGACCTATTTAAAGGTAGAGCAGTGTACTATGAGCCGCATATACACAGCTGagtatgaatgaatgtaaaCATGCTGGAAGCTGAAAGCGGCTGCGGGGCTGAGGGTAACTCCGCGTATCGCTGGTGGAGTGTTTCAGTAAGATAACTGAATCAGTCAGTGTTAGTGAAGATCTTTAGTGAAGGCTGAGCGCGGGGACTGAGACGCACAGCAGCGTCTGTTTATCTGACTGTAGCTCTGGATGAGTGAGTTGAGTTGAATGGCGAACAGCAAAATGATTTGTATTAGAACTGTGTTTGCGTGCTGCGTGTGCTGATGTGTTTGTAGAATCTGAAATGGCATAGTATCAGTATTTACTAAGTTTTACCTTTACAGCCTTATGTGCAGTAAAATTTGGTGTAGCAGGTTTCCACTGAGAGCAGCTTTGGTGTTActgtaagttttattttttttgtaattggaaACAGTTAGTAGACTTTCACAATGCAGTCCAGTCAAATGTAGCTCAAATACAGCCTGTTGGAAGTCTGTACCAAGATTAGAATATCAACTAAGCACCAACTAAGGCTTAAGACCTAAAATATAAACGAGGCTACATCACAATGTCTGCATTTTGTGCAAAGAGCATTTTCCAAAGCCTCAGGTGCTCCATTCACAGAGTTTCAGTGTCAGTTCGATTGACACCATGCAGAACTTTTCTCATCAAACGGGGTCCACTTTTCTCTCAGACTCCCAAAGTGGCCCTGTTTTGTTGGGGTGTTGTTGGAAGTGTCGCATATGCCTCAGCACAGGAGGCAGTACTTCCTCAGAGGACTGCAGAGAAGAAGTCTTCAGTTGCCAGAGTGCAGGTCTACAGGCTCATTTTCTTCCTGAGACTAAGCATCCGTGCCTTGGTACTCCTGTTCAAGTTCACCCCCATCTTGCTGCTCTACCCCCTGACCCTTCTCTCACAGCGCTGGGCCTCCTGTTGGCTCAGTGCCCTGCTGTGGGTCACAGAGTCCTCTGGTCCGACGTTCATCAAGCTTGGTCAGTGGGCCAGCACACGACGGGACATCTTCTCCCAGGAGTTCTGTGACCGCTTTTCACGTCTCCATGTGAGAGTTCAGTCCCACTCCTGGGCTCACACTAAGCAATGTCTGAAGCGGGCCTTCGGTGAGGGCTGGAGGCAGCTGTTTGTGTTCGACAGCAAGGAGCCTGTCGGTTCAGGCTGTGTGGCACAAGTGTACAGGGCCAAGGCTCGAGTCTCGAGTGTGGAGGACCCGGCATTCCAGGAGTTGGTGGAGAGCCTTGAGAAAGAGGACCTGCTCGAAGCGTGGGAGATCCCTGGGCTTGGGAATGCTATAAACCACTGGTTGGGGTCGGAGCAGGTAGGGAAGGTGGAGGAGCTGTCAGAGGGCCAGGAGAGCACTGCTGAATTTCCATACACTCGTAGAAAGTACACAGAAGAGGATTGTCTCATGCCGGTGGCAATAAAGGTGCTTCATCCTGGCATCAGAAGACAAGTTCAAATAGACCTGATTCTTATGAAGGTGGGAAGCGTGCTCATCAGCTTCTTACCTGGCCTTAAGTGGCTCAGTCTGCCTGAGGTGGTGGATGAATTTGAGAAGCTCATGACCAAACAGATAGACCTTCGCTTTGAAGCAAGGAACATTGAACGGTTTAAGAATAACTTCAAGGACTTGGAATATGTCAAGTTTCCAACTCCATTGAGACCATTTGTCACCAGGACTGTCCTGGTGGAGACATATGAGgaaaGTGAACCCATTTCTAGTTACCTCAAATCGGAAGTTCCCGCAGCTGTCAAGCAGAGAATTGCCCGAATGGGAGTGGACACTCTGCTCAAAATGGTGTTTGTGGATAACTTTGTCCACGGAGACCTCCACCCAGGGAATATCCTAGTGCAGAGCGATCAGGGGGCTGGACCTCAAGACAGGGCCACCCTGACAGACCTGTGGGACACAGTGGTGGTCAGCATGAGGCCGACTCCTCCTCCGCTCCGACTGGTGCTGCTGGATGCTGGGATTGTGGCCCAGCTCAGTGAGAACGACCTGTGCAACCTGAGAGCGGTTTTCACTGCTGTTGCTCTCAGACAGGGAGAACGTGTAGCCGAGTTGATTCTGAAACATGCCAGGGCCAGTGAGTGCAAGGATGTGCCTCGATTCAAAAAGGAAATGTCTGAGCTTGTGAACCACGCACTCAGCGACACTCTTTCTCTGGGGAAGATTCAGGTGGCAGATCTGCTGTCTCGAGTGTTTGGATTGCTCATCCGCCATAAGGTGAAGCTGGAGAGTAACTTTGCTTCCGTTGTGTTTGCCATCATGGTACTGGAAGGCCTGGGCAGATCACTGGACCCTAACCTGGACCTGCTGGAGATCGCTAAGCCTCTGCTGCTGAAGAATTGTGCTTCACTTCTCTCCTGAGCTTCTGCATTGAACTGGGGCCACCTGAACACAATGAGCCTGTTTGCGTCCAGTTAGCTTTGACAAATGAGAAACATCTAGGGGATTAATTAGGAATGGATTGGTAATAGATTTTTAATTAGGCAAGGATAAATTGAGGGTTTAACAGGTGTTCattctgttaaaaataaaggtgcaaaTAAATCTACAGTAAATTTTTTAACTTACTCTGGGTCTTTCCCTTTGCCACTCCTTTACAATATCAACTGATGACCTCATTCTCTTGACTGGAATAAAAATTATGAACAATGAGGTACAGATACATTTTGATTTGAGTTACAGCCTAATCAAATTGAGAATTTCCCTAAGATTTGCATCTGAACGAAGTAATAATGAAAGGGTTCAggaaatgtgaacagtcaaggTTTTACACTAAGAATCCAGATGACATACATGCCCTAACAATGCAATGAAACCTAGAGGTCCACACATTCTTAGAAGCACTATTTGGTACACTGTGAATTTAATCCCAGTGAGAATAATTAGCCAGTAATATTCTAAAGTGTGAAAGTAGTGTTATTTATGTTGGTGTGTCTCATTTTATTGTGGGCAACCTCAGGGTTATACTTAAGCAGTCAGTGTCCTATGATACGGTAACTGATGTATAGACTTAATTTTAGACTGGAAAATTTTATCTAACatcagatttatcagtctatAAAACTGATGAAGTACAATCTTATATATTTTGCACAATTGTCTTGTATTATGTTCTGCATggctattttttcttttgccaaccccccaaaaaatccttatctattttgttttattgatttatttactttGTCGGTAAGAACATTTTGCTTTTCTGTGCTCAGACTCCTGTATTAAACGTGTTCACCAATACCAA

Function

GO: NA

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103316 lncRNA downstream 10608 25636972 ~ 25645157 (-) False G76590
TU103308 lncRNA downstream 10608 25644568 ~ 25645157 (-) False G76590
XR_002650276.1 lncRNA downstream 14632 25639947 ~ 25641133 (-) True LOC111193116
TU103310 lncRNA downstream 15039 25639302 ~ 25640726 (-) True G76590
XR_002650275.1 lncRNA downstream 16632 25637072 ~ 25639133 (-) True LOC111193115
TU103322 lncRNA upstream 51858 25713483 ~ 25713920 (-) True G76595
TU103428 lncRNA upstream 100897 25762522 ~ 25830697 (-) True G76676
TU103455 lncRNA upstream 416813 26078438 ~ 26079115 (-) True G76701
TU103461 lncRNA upstream 425727 26087352 ~ 26102108 (-) True G76706
TU103462 lncRNA upstream 484004 26145629 ~ 26146804 (-) True G76707
XM_022672425.1 mRNA downstream 23994 25615420 ~ 25631771 (-) True bbs4
XM_022671929.1 mRNA downstream 93818 25351525 ~ 25561947 (-) True LOC103047119
XM_007235184.3 mRNA downstream 328212 25317126 ~ 25327553 (-) True mpi
XM_022672420.1 mRNA downstream 353997 25282789 ~ 25301768 (-) True rab3il1
XM_007231579.3 mRNA upstream 182992 25844617 ~ 25857522 (-) False mrps35
XM_015600836.2 mRNA upstream 182992 25844617 ~ 25857522 (-) True mrps35
XM_007231581.3 mRNA upstream 411472 26073097 ~ 26077993 (-) True cdkn1b
XM_007231580.3 mRNA upstream 417751 26079376 ~ 26085001 (-) True yars2
XM_007231582.3 mRNA upstream 429637 26091262 ~ 26134844 (-) True LOC103026228
XR_002650273.1 other downstream 353997 25288850 ~ 25301768 (-) False rab3il1
XR_002650274.1 other downstream 353997 25289882 ~ 25301768 (-) False rab3il1
TU103036 other downstream 471296 25184209 ~ 25184469 (-) True G76424
XR_002650272.1 other downstream 705743 24949044 ~ 24950022 (-) True LOC107197705
TU102973 other downstream 735400 24914298 ~ 24920365 (-) True G76377
TU103672 other upstream 1201789 26863414 ~ 26868817 (-) False LOC103031319

Expression Profile