RNA id: XM_007244266.3


Basic Information

Item Value
RNA id XM_007244266.3
length 2312
RNA type mRNA
GC content 0.50
exon number 9
gene id wwox
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 20289830 ~ 20632543 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTGTCCGTGCAGTGGTGGAGAGTGCTGCTGtgggtctgctgctgctggtggtggagTGGAGCTGTTCTGACTGAGAGACACAGAAGCGGCTGAATTAGAAACTCTTACAGGAGAACCGCACAGCGCAATGGCTGCTCTTAAATACGCGGGAATGGACGATACTGACAGCGAGGACGAGCTGCCCCCCGGCTGGGAGGAGAGATCCACCAAGGATGGCTGGGTTTATTATGCCAAtcaCGAGGAGATGAAAACACAGTGGGAGCATCCTAAAACTGGAAAGAAGAAACGCTGTGCTGGAGatcTGCCGTACGGGTGGGAACAGGAGTTGGACGACAAGGGTCAAGTCTTTTATGTTGATCACATCAACAAGAGAAAGACGTACTTCGATCCTCGGCAGGCCTTCACCATAGAGGATGTACAAGTAAAGCCCAAGCGTTATGATGGAAACACTGCTGCCCTGGAGATTCTACAGGGTCAGGATCTCTCCAACAAGGTCATAGTCATTACTGGAGCCAATTCTGGTGTCGgTTTTGAGACGGCGCGCTCCTTCGCTCTTCATGGGGCTCATGTGATCTTGGCCTGCCGGAATAAAGCTCGCAGCAGTAAAGCAGTTAGTCTGATTCTAGAGGAGTGGCACAAAGCTCGCGTTGAGGCCATGACACTGGACCTGGCCTCGTTGAGAAGTGTTCAAGAGTTTGCAGAGGCCTTTAAAGCACGGAAACTgcCTCTGCATATTCTGGTGTGTAATGCGGCAGTATCTACACAGCCCTGGTGTTTGACTGAGGACGGGCTGGAATCCACCTTCCAGATCTGCCACCTGGGCCACTTCTACCTGGTGCAGCTGCTGCAGGATGTGCTGCGGCGGTCAGCTCCTGCTCGTGTGGTGGTGGTGTCCTCTGAATCCCACAGGTTCACAGAGCTGCTGGACTCGTGTGGTAAAGTGGACTTGGCTCTGCTCTCTCCGCCTCAGAAGGAGTACTGGTCCATGCTGGCCTACAATAGAGCCAAACTCTGCAACATCCTGTTCTCCAATGAGCTGAACCGCCGCCTGTCTCCGCACGGGGTCACCTCCAACGCAGTGCACCCTGGGAACATGATGTATACGTCCATCCATCGCAGCTGGTGGCTCATGACCTTCCTCTTCACCCTGGCACGACCGTTCACCAAGTCTATGCAACAGGGTGCGGCCACCACCGTGTACTGCGCAGTGGCTCCGGAGCTGGAGGGACTGGGAGGGATGTACTTCAACAACTGCTTCCGCTGTCTTCCGTCTCAGCAGGCCCAGGATCCCTCCTCCGCCCTCAGCCTGTGGGAGCTCAGCGAGAGGCTGGTCCAGGAGAGGTCCACCAACCCTCAGCCAGTGTAACCTCAGGATCCCGTCGCGTGCCAGTGACCCCGACACCTTCCGTGCCCTGCCGCACGTTTTCCATCACCAGGAAGTGAAGGGgactgtgtgttttatatttgggaaatatacagtatacactactgtactcactgtacaaaaatacaaacaaaaaaacaacagccaAATCCTTTAGTCTGCACCTTCAGTGTCCACTGTCACCGTTCGCCATAAACCAAGCCTGGAGAGTCTGTAGGAGCTAGCACTGTGTAACGTCACTGTATATATTTCCCAGGCCGTTCCAGATTCCTCACCTTTTGTTCCTCACATGAGCTATAGAACACCGTCTAGAACACTGTTCTCTAATACGGCTCTCTAAACATCGATCACCACACGTTCCAGCTAGGGGCTCTACGTTATAGCAAATAcacttagaaaaaaatagaacatcatCTCACAATCTTAAACTACACAATTTTTAATCTTTGAATTCGAGTTCTGTTGAAATAGCTGGGAATTCTCGTTCTCAAGGTCCATCCATCCCTTTGTACAGATTGAATTAAGAGAATGAGTAGATGAGTGCACTAAAGAAGCTACAAAGAAGTAGTGGAGGAAGTAGTGGAGGAAGTAGTGGAagagtgtatgtatgtgtgtgtatgtctgtgtgtgtgtgtgtgggtgggcgGGTGTGAATGCGTACGAGAGTGGTTTCCTATTTACACATAAGACCACTGAAGTTCCTACAAATCTGCCTGTATAGATATGCTGTACATGATACACATCAGGTGATGTTCTAATGCGCTTTATGTTTCTGTAGATTCTGTAGATTAGTAGAATTCACGACCCCCAATCTGCCGAGAGACTCCCGATCCAAACTATGAATTTTCGAACTTTTACAAaatgctatgctaatgctaattacaATGAAGCAGCATCTCTGAGGAGAACAGGAGGGCCAGTGCTggct

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K19329 WWOX; WW domain-containing oxidoreductase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU101308 lncRNA upstream 1783 20285164 ~ 20288047 (+) True LOC111193104
XR_002650258.1 lncRNA upstream 2418 20284677 ~ 20287412 (+) False LOC111193104
TU101257 lncRNA upstream 167090 20060370 ~ 20122740 (+) True G75131
TU101114 lncRNA upstream 484854 19804766 ~ 19804976 (+) True G75034
TU101113 lncRNA upstream 490181 19799385 ~ 19799649 (+) True G75033
TU101490 lncRNA downstream 207990 20840533 ~ 20840981 (+) True G75300
TU101501 lncRNA downstream 237167 20869710 ~ 20873881 (+) True G75309
TU101511 lncRNA downstream 254612 20887155 ~ 20910244 (+) True G75313
TU101513 lncRNA downstream 270533 20903076 ~ 20910244 (+) False G75313
TU101507 lncRNA downstream 306808 20939351 ~ 20941050 (+) True G75310
XM_022672309.1 mRNA upstream 5157 20278577 ~ 20284673 (+) True LOC103030013
XM_007244265.3 mRNA upstream 13275 20253846 ~ 20276555 (+) True LOC103030550
XM_022672297.1 mRNA upstream 59830 20209735 ~ 20230000 (+) False tdrd12
XM_015604555.2 mRNA downstream 244874 20877417 ~ 20880566 (+) True faap24
XM_007244271.3 mRNA downstream 249287 20881830 ~ 20895098 (+) True LOC103033048
XM_015604493.2 mRNA downstream 280238 20912781 ~ 20915900 (+) False ccdc34
XM_007244274.3 mRNA downstream 280264 20912807 ~ 20915900 (+) True ccdc34
XM_007244275.3 mRNA downstream 284963 20917506 ~ 20923676 (+) True LOC103034349
TU101298 other upstream 81908 20203619 ~ 20207922 (+) True LOC103028745
TU101007 other upstream 756757 19527991 ~ 19533073 (+) False LOC103044129
TU100801 other upstream 1204274 19082816 ~ 19085556 (+) True G74832
TU100573 other upstream 1834633 18454851 ~ 18455197 (+) True G74649
TU99974 other upstream 4001501 16286676 ~ 16288329 (+) True G74169
TU101630 other downstream 390713 21023256 ~ 21025128 (+) True G75383
TU101641 other downstream 456079 21088622 ~ 21096906 (+) True G75391
XR_002650259.1 other downstream 617924 21250467 ~ 21264776 (+) True mov10l1
TU102047 other downstream 2122609 22755152 ~ 22772561 (+) False LOC103028957
TU102309 other downstream 2854987 23487530 ~ 23487870 (+) True G75938

Expression Profile