Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022672318.1 |
| length | 1399 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 13 |
| gene id | chid1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 21059432 ~ 21064841 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006032 | chitin catabolic process | biological_process |
| GO:0005975 | carbohydrate metabolic process | biological_process |
| GO:0005764 | lysosome | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0004568 | chitinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU101628 | lncRNA | upstream | 12152 | 21046815 ~ 21047280 (+) | True | G75381 |
| TU101557 | lncRNA | upstream | 83119 | 20975967 ~ 20976313 (+) | True | G75342 |
| TU101527 | lncRNA | upstream | 112408 | 20945613 ~ 20947024 (+) | True | G75323 |
| TU101507 | lncRNA | upstream | 118382 | 20939351 ~ 20941050 (+) | True | G75310 |
| TU101513 | lncRNA | upstream | 149188 | 20903076 ~ 20910244 (+) | False | G75313 |
| TU101654 | lncRNA | downstream | 82967 | 21147808 ~ 21148349 (+) | True | G75403 |
| TU101639 | lncRNA | downstream | 125925 | 21190766 ~ 21195771 (+) | False | G75390 |
| TU101637 | lncRNA | downstream | 127822 | 21192663 ~ 21195771 (+) | True | G75390 |
| TU101656 | lncRNA | downstream | 134446 | 21199287 ~ 21204023 (+) | True | G75405 |
| TU101664 | lncRNA | downstream | 171751 | 21236592 ~ 21238466 (+) | True | G75413 |
| XM_022672316.1 | mRNA | upstream | 1592 | 21047896 ~ 21057840 (+) | True | thoc5 |
| XM_007244297.3 | mRNA | upstream | 1592 | 21047896 ~ 21057840 (+) | False | thoc5 |
| XM_007244405.3 | mRNA | upstream | 37561 | 21017454 ~ 21021871 (+) | True | LOC103046250 |
| XM_007244289.3 | mRNA | upstream | 61366 | 20991758 ~ 20998066 (+) | True | LOC103038014 |
| XM_022672313.1 | mRNA | upstream | 68855 | 20974790 ~ 20990577 (+) | True | LOC103037268 |
| XM_022672320.1 | mRNA | downstream | 35568 | 21100409 ~ 21187436 (+) | True | srpk2 |
| XM_022672323.1 | mRNA | downstream | 185628 | 21250469 ~ 21264776 (+) | False | mov10l1 |
| XM_007244315.3 | mRNA | downstream | 205897 | 21270738 ~ 21273031 (+) | True | LOC103044722 |
| XM_007244407.3 | mRNA | downstream | 210101 | 21274942 ~ 21293323 (+) | True | LOC103046854 |
| XM_022672324.1 | mRNA | downstream | 214485 | 21279326 ~ 21293323 (+) | False | LOC103046854 |
| TU101630 | other | upstream | 34304 | 21023256 ~ 21025128 (+) | True | G75383 |
| TU101298 | other | upstream | 851510 | 20203619 ~ 20207922 (+) | True | LOC103028745 |
| TU101007 | other | upstream | 1526359 | 19527991 ~ 19533073 (+) | False | LOC103044129 |
| TU100801 | other | upstream | 1973876 | 19082816 ~ 19085556 (+) | True | G74832 |
| TU100573 | other | upstream | 2604235 | 18454851 ~ 18455197 (+) | True | G74649 |
| TU101641 | other | downstream | 23781 | 21088622 ~ 21096906 (+) | True | G75391 |
| XR_002650259.1 | other | downstream | 185626 | 21250467 ~ 21264776 (+) | True | mov10l1 |
| TU102047 | other | downstream | 1690311 | 22755152 ~ 22772561 (+) | False | LOC103028957 |
| TU102309 | other | downstream | 2422689 | 23487530 ~ 23487870 (+) | True | G75938 |
| TU102363 | other | downstream | 2850950 | 23915791 ~ 23917603 (+) | True | G75974 |
