RNA id: XM_007246549.3


Basic Information

Item Value
RNA id XM_007246549.3
length 3098
RNA type mRNA
GC content 0.49
exon number 2
gene id gpr37
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 18939095 ~ 18950348 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TGTACGGAGATCCTCTTCCACAGAGAGGCGCTCTCTCACCAGGTGTCTCCCAGGCCAGCAGGCGCCTCCCTGAGAGCCCCAGCGGGAGCCGGGCAGCCGCAGCCGGAGTCAGTGTCCGGAGCCTCTACTCCATCACCCTGCCCGGAGCTGCCGCACAGCAGGAGATGTGGATGTGGAGCTGGAGAGGAGAAATACGGGATGTTTCTGGATGCTGGAGTGAAGGATGAAGTGGAGTGGaggttttttattcttttctcaCAGTGATGAACTCTCATGAAGTGAGGTTTGGACTGTGTATACGGAGCTGTGCGCTGGAGAGGCGGGGATAATGTCCTGAACTTGAGGATCTTTCTACAGATTGATGGATTTATGAACATGGGGTTGTGAGTATGGTGTGACTGAAGAGTTGAGGGGAACATGGGGATACAAATGAAGAGATTGTTTTGTCTGCTGGTGTGTTGTGAACTTTCTTCACTCCTAAACGGGAGTCCAAATTTGAGCTGTAGAGATTGTGAGCAGAGCAGCAGCTCTGAGAACCTGTTAAGTTCCAGAACTAGACCTGAAAACCTGCTGAGTTCCAGAACTAGACCGGAGGAGCGGCTGAGTTTTAGAACTAGACTAGAGGACCTGCTGAGTTCCAGAACTAGACCTGAAGACCTGCTGACTCCCAGAACTAGACCTGAGGACCTGCTGAGTTCCACAACAAGACCTGATCAGGACCTACTGGCTTACAGAACCAGCACTAAGGACCTGCTGAGTTCCACAACTAGCCCAGAGGACCTCCCTCAGAGAGATGCTAGTTATCTTCAAGCCCAGCGGTCCTCCAGCCGCCCACTCCTGCAGAAAGAGCCAAGTTCACATCCTCGGCACAAACGTGGAACCAGCACGGACCCTGAGCCCGCCTCAGCAGACCACAGTGATGCTCAGAAGTTGGTGGAAACCCTCCCTAAGCCCCTCGCCCAGAACCAGTCCACATTCTCCCCCGGTGACTTCACTCTGGATAACGGTTTATTTACTGTACCAGAGGGCGACTACCAAGACTTCACCCCGCTAGTGCCCCTCAGCACCCGGCCCAAGACCCCCGGGGTTAAAAACCCCTTCTACCCGCTCACAGGAGACTCGTACGGGGCGTACGCCATCATGTTCATCTCCATAATCATCTTCACAGTGGGGATAATCGGAAACATAGCAATCATGTGCATAGTCTGCCATAATTACTACATGCGGAGCATTTCCAACTCGCTGCTCGCCAACCTGGCCCTGTGGGATTTCCTCATAGTCTTCTTCTGTTTACCTCTGGTGATCTTTCATGAGCTCACCAAGGACTGGCTGCTCGGAGAGTTCTCCTGTAAAATAGTTccttatattgagGTGGCTTCCCTGGGCGTAACTACCTTCACTCTCTGCGCCCTGTGTATCGACCGGTTCCGTGCGGCCTCCAACGTGCAGATGTATTACGAGATGATTGAGAACTGTGCCTCCACTGCGGCTAAACTCGCAGTCATCTGGATAGGAGCTCTGCTGCTGGCTCTGCCTGAGCTATTGATTCACCAGCTGGTGAGAGAGGAGCGCGAGCCCCCGGAGGTGACCCCCTGCGAGCGCTGCGTGGTCCGCATCTCCACCGCACTTCCGGACACTCTGTATGTTTTGGGCCTCACCTACAATGGCGCCCGTCTCTGGTGGTATTTTGGTTGCTACTTCTGCCTGCCCACCATCTTCACTATTATCAGCTCGGTGGTGACGGCGCAGAAGATCCGCAAGGCTGAGCGAGTCAGTGTGCGGGGGAACCGTAAGCAGATCCAGCTGGAGAGCCAGATGAACTGTATGGTGGTGGCTTTGGCCATCCTCTACGGCTTCTGTGCCATTCCTGAAAACATCTGCAACATCATGTCCGTGTACATGGCGGCGGGGGTGCCGCGCCGCACCCTGGATATTATGCACCTGGTCAGTCAGATGCTGCTGTTCTGCAAGTCAGCGGTCACACCGGTGCTGCTGCTGGCCTTATGCAAACCCTTCGGTAGAGCTTTCCtggactgctgctgctgctgctgggaggAGTGCGGCCCACCAAAGTCGTCCACGGCCACCAGTGACGATAATGAACACGAGTGCACCACAGAACTGGAGCTTTCACCCTTCAGCACCATGCGCAGGGAAACATCTACCTACACTGCTGCAGGCACACACTGCTAGGGTTCTTTTATCCTACCTATGCCCTATGGAGTGTCCCACCCATAGGACTCTGTATAAAGGGCTCTGATCCTCTGAACAAACCAAGTGAGACATACACAGTTTCATACTGCTTCACACTAAGTTAGAAATGATGAAGGGAAGGAAAAGGGAGCATACTGGCAACACACAGAGTACTTTATCATATCTCTTTACTATAGGGACAAAAAGCCATGCATTTATTCGAGGTCCAGAGGGTGTTACAACTGTAAGCGTCCACTGCTGTTTACAGGAGGAAATCACGAGCGTTACCTTTAGTTTAAGTTCAGTTCATAGTGATTGTTAATTGTGAATTAACTCACCTTTATTGTTTTTGCACACTTGtcttacacagtgttttatttctatttaaatgGAATGTTTACATCTTTAGTTCAAtgaaacattacattattaGTATCTTTGAGTTTTATGGAAAATAAGAAAGTGAAAAAGGCTGTTAGTAAATGTGTTGTGtcgtaaaaaaaagaaaagaaaatggtgATTCTTATGAATCAGTTCAAAGTGAAACCTGGCTCCCTTGCTATGTAAGTATTATTATGTTTACTCTGTGTTTGATAGCAGAAAAAAAGGATATCATGCACTTCAGTTGGCATTATAAAGCACTGATAAAGCTGTTGTTTTAGCTCAAATatcactttaataaaaaacaaaacaacaaaaaaactgaaaaacctgACAATCCATTTTTGAGTCTGAGACCTATAAGTCAAGCACCATTTATACAACCTGTTGAATGTGAACTGTACTGTAAAGAGAGAAGTCTGGGCTTTCTAGTCAGACCTCAATGGTAAGGGTGTGACCAACAGAGCATGGGGACTTTCTTTTCAAACTGGCAACCATCCCCTTTCTTCAAAAGGAGATCCTTA

Function

GO: NA

KEGG:

id description
K04243 GPR37; prosaposin receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_002650255.1 lncRNA upstream 235208 18702721 ~ 18703887 (+) True LOC111193102
TU100662 lncRNA upstream 311067 18627649 ~ 18628028 (+) True G74714
TU100608 lncRNA upstream 312685 18625071 ~ 18626410 (+) True G74672
TU100600 lncRNA upstream 404965 18533808 ~ 18534130 (+) True G74668
TU100586 lncRNA upstream 459750 18478129 ~ 18479345 (+) False LOC103029914
TU100720 lncRNA downstream 7290 18957638 ~ 18970866 (+) True G74770
TU100774 lncRNA downstream 42330 18992678 ~ 18994863 (+) True G74810
TU100776 lncRNA downstream 42440 18992788 ~ 18994863 (+) False G74810
TU100800 lncRNA downstream 131964 19082312 ~ 19082521 (+) True G74831
TU100802 lncRNA downstream 135455 19085803 ~ 19086231 (+) True G74833
XM_015605137.2 mRNA upstream 1968 18893227 ~ 18937127 (+) True pot1
XM_015605138.2 mRNA upstream 1968 18893227 ~ 18937127 (+) False pot1
XM_022672241.1 mRNA upstream 100338 18672401 ~ 18838757 (+) True LOC103033497
XM_007246546.3 mRNA upstream 270635 18653276 ~ 18668460 (+) True LOC103032349
XM_015605105.2 mRNA upstream 295016 18637244 ~ 18644079 (+) True LOC103032021
XM_007246552.3 mRNA downstream 106439 19056787 ~ 19081399 (+) True LOC103034777
XM_007246553.3 mRNA downstream 106441 19056789 ~ 19081399 (+) False LOC103034777
XM_007246554.3 mRNA downstream 117489 19067837 ~ 19081399 (+) False LOC103034777
XM_022672249.1 mRNA downstream 148168 19098516 ~ 19114949 (+) True iqub
XM_007246558.3 mRNA downstream 169199 19119547 ~ 19133880 (+) True slc13a1
TU100573 other upstream 483898 18454851 ~ 18455197 (+) True G74649
TU99974 other upstream 2650766 16286676 ~ 16288329 (+) True G74169
XR_002650242.1 other upstream 4018092 14891534 ~ 14921003 (+) False rpgrip1l
TU99159 other upstream 4289544 14648829 ~ 14649551 (+) True G73533
XR_002650241.1 other upstream 6041164 12871484 ~ 12897931 (+) False LOC103043719
TU100801 other downstream 132468 19082816 ~ 19085556 (+) True G74832
TU101007 other downstream 577643 19527991 ~ 19533073 (+) False LOC103044129
TU101298 other downstream 1253271 20203619 ~ 20207922 (+) True LOC103028745
TU101630 other downstream 2072908 21023256 ~ 21025128 (+) True G75383
TU101641 other downstream 2138274 21088622 ~ 21096906 (+) True G75391

Expression Profile