RNA id: XM_007257732.3


Basic Information

Item Value
RNA id XM_007257732.3
length 1719
RNA type mRNA
GC content 0.48
exon number 8
gene id tmem65
representative False

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 3298210 ~ 3317552 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CGTCAGGAGTCACACAGAAAGTCTCAGAGCTGAAAAATGAAGTGTTTTCTTTGGGATTTTCGTTGTTTTTCTGCATCTAGACATCGAATATCAGACGGAATGTGATTTAAAATTTGTGTAGCACTTCTCTACACAGGTTCCCGCGTGTTAAAAAGACGATAATACTGATATTAAGAGCAGCGGAGCGTGGTTTCCACTTGAGTCACCCTGTTGTCTGGGCagggtttagggtttagggAGTGAACTGGGCTGGCTGAGCTCAAACTGAGCTCCTCACACAGCAGAAAAACTGCCTTCAGACTTCATTACAACACCCGTCCGGCTCAGTTTTTGCTTTAACTCTCACAGAAATGCGGTTTACAGCCTCcaaaagctgagagaagagcgCTGCTGTGGGctttgtgtgtctttgtgagggagagagaagataAATGAAGGACTGACAGAGTCTGTAACCCTGGCTTAGATTCTGCCCAAGACTgactcctcctttcctccacAATGCTGAGGCTGTGTTTGTCCAGAGCTCTGCAGCCATGTGCTCTGGGTCTGAGAGGAGCACAGGGACGGTCCAGCCCCGGCCCCCCGGCACTACTGTTCCATATGCAGAGGTGCTCCTTGGGAACTCACAAGCATAAGGACAAACTAGAGCTGCTAAACTCCCCGAAGGGAGCCAAGGACTTTATCTACAGTCTGCACCCCACGGAGCGGAGCTGCCTACTCAAAGAGCTGCAGAGCTTCGAGTCCATGGCTATTGCTCAagAGAAACTGGAGTCTTTGCCTCCGAACGCCAGCCAGCTGAGATATGTGCTCCTTCATAACGCCATCCCGTTCGTTGGCTTCGGCTTTCTGGACAACGCCATCATGATCGCTGCAGGAACACAGATCGAGCTGTCTATCGGAGTGACGTTGGGAATTTCAACAATGGCAGCGGCTGCTTTGGGGAACCTGGTGTCTGACCTGGCTGGACTGGGaTTAGCAGGTTATGTGGAGGCTCTAGCTGCCAGATTTGGAATGCAGATACCTGACCTCACACCTAAACAGGTCGACATGTGGCAGACCAGAGTCAGCTCACACAtgGGGAAAGCCATCGGAGTCACCATCGGCTGCATTCTGGGGatgtttcctctcttttttctcagtgatgaagatgaagaggagaagaagaagaaaaaggctGCTGCTCATACTGCACCCTCAGACTCCAAGTAATTTACCTGGGTGCTTTGGACTCAGTCCAATTAACACTATACCAATGGCTCACTCCAAATTCCATTAGCTTCTAAAtggagttttattttattacgtTTTACCTGGATTTAATGGAATTCAAGGCTCAGCTGCAAAATATGGGAGTTTGCTGGTTTTGAGAGACatacttaagtttttatttgtttttaagtttgTAAGGTATGGATTTGCACCACAGAGGAGATGTAAGTAAGTGTTAAGGGATGGAGGGAAGGGCAGGAAGGTACTACAGCTaacgtatttttcgcactataaggcgcatcagattataaagcgcattatgcgacactagtaaggaactggGGTCTCgatgtgttttccttctaatttagcaggtgcGAAAAAACTAGTGCTTTGCGTGGTAAgtggctaatgcttatgctgctccagcagtgctagctggggttagcagcaggctacagtccgatatatttACCTcggaatggcaaaagagctagcgcttagcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95668 lncRNA downstream 6249 3277476 ~ 3291961 (-) True G70923
TU95513 lncRNA downstream 181121 3116884 ~ 3117089 (-) True G70812
TU95510 lncRNA downstream 182215 3110805 ~ 3115995 (-) True G70809
TU95495 lncRNA downstream 215005 3082976 ~ 3083205 (-) True G70795
TU95466 lncRNA downstream 342036 2954612 ~ 2956174 (-) True G70769
TU95685 lncRNA upstream 97036 3414588 ~ 3415039 (-) True G70938
TU95699 lncRNA upstream 133353 3450905 ~ 3451612 (-) True G70946
TU95701 lncRNA upstream 137325 3454877 ~ 3455224 (-) True G70947
TU95705 lncRNA upstream 140267 3457819 ~ 3458798 (-) False LOC111193045
TU95707 lncRNA upstream 142329 3459881 ~ 3522387 (-) True G70951
XM_007257736.3 mRNA downstream 270517 3023419 ~ 3027693 (-) True LOC103047641
XM_022671901.1 mRNA downstream 278457 2982047 ~ 3019753 (-) True LOC103025117
XM_007257737.3 mRNA downstream 315564 2958649 ~ 2982646 (-) True rmnd5b
XM_022671952.1 mRNA downstream 481675 2775243 ~ 2816535 (-) False anxa6
XM_022671951.1 mRNA downstream 481676 2764522 ~ 2816534 (-) False anxa6
XM_007257731.3 mRNA upstream 6346 3323898 ~ 3335786 (-) True rnf139
XM_007257730.3 mRNA upstream 18657 3336209 ~ 3346476 (-) True tatdn1
XM_022671968.1 mRNA upstream 45019 3362571 ~ 3407431 (-) True mtss1
XM_022671970.1 mRNA upstream 45019 3362571 ~ 3407427 (-) False mtss1
XM_022671969.1 mRNA upstream 45019 3362571 ~ 3407420 (-) False mtss1
TU95334 other downstream 553138 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 30248 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 451609 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 1094396 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 1564618 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 1606448 4924000 ~ 4924071 (-) True trnaw-cca_42

Expression Profile