Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007258578.3 |
| length | 1599 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC103027348 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 7671558 ~ 7674663 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0045766 | positive regulation of angiogenesis | biological_process |
| GO:0030154 | cell differentiation | biological_process |
| GO:0060681 | branch elongation involved in ureteric bud branching | biological_process |
| GO:0045542 | positive regulation of cholesterol biosynthetic process | biological_process |
| GO:0072163 | mesonephric epithelium development | biological_process |
| GO:0051781 | positive regulation of cell division | biological_process |
| GO:0008543 | fibroblast growth factor receptor signaling pathway | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:1902533 | positive regulation of intracellular signal transduction | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005938 | cell cortex | cellular_component |
| GO:0005104 | fibroblast growth factor receptor binding | molecular_function |
| GO:0008201 | heparin binding | molecular_function |
| GO:0044548 | S100 protein binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU97062 | lncRNA | upstream | 18695 | 7577710 ~ 7652863 (+) | True | G71928 |
| TU97050 | lncRNA | upstream | 143767 | 7527329 ~ 7527791 (+) | True | G71917 |
| TU97043 | lncRNA | upstream | 173288 | 7497778 ~ 7498270 (+) | True | G71910 |
| TU97028 | lncRNA | upstream | 185148 | 7486170 ~ 7486410 (+) | True | G71895 |
| TU97027 | lncRNA | upstream | 187407 | 7483663 ~ 7484151 (+) | True | G71894 |
| TU97065 | lncRNA | downstream | 880 | 7675543 ~ 7675776 (+) | True | G71931 |
| TU97066 | lncRNA | downstream | 1729 | 7676392 ~ 7685337 (+) | True | G71932 |
| TU97074 | lncRNA | downstream | 25219 | 7699882 ~ 7711858 (+) | True | G71936 |
| TU97076 | lncRNA | downstream | 36948 | 7711611 ~ 7718943 (+) | False | G71936 |
| TU97086 | lncRNA | downstream | 58779 | 7733442 ~ 7736160 (+) | True | G71944 |
| XM_022672039.1 | mRNA | upstream | 19068 | 7612712 ~ 7652490 (+) | True | LOC103027052 |
| XM_007253574.3 | mRNA | upstream | 459062 | 7206477 ~ 7212496 (+) | True | LOC103023202 |
| XM_022672032.1 | mRNA | upstream | 498010 | 7139036 ~ 7173548 (+) | False | LOC103023840 |
| XM_007258573.3 | mRNA | downstream | 45217 | 7719880 ~ 7725813 (+) | True | mars2 |
| XM_022672043.1 | mRNA | downstream | 765474 | 8440137 ~ 8641348 (+) | True | spock1 |
| XM_022672044.1 | mRNA | downstream | 1000186 | 8674849 ~ 8687469 (+) | True | LOC103031395 |
| XM_022672045.1 | mRNA | downstream | 1017287 | 8691950 ~ 8726635 (+) | False | LOC103028966 |
| XM_007227994.3 | mRNA | downstream | 1017294 | 8691957 ~ 8726635 (+) | True | LOC103028966 |
| TU96877 | other | upstream | 786017 | 6881587 ~ 6885541 (+) | True | G71788 |
| TU96736 | other | upstream | 1132764 | 6525641 ~ 6538794 (+) | True | G71682 |
| trnaa-agc_15 | other | upstream | 1633810 | 6037676 ~ 6037748 (+) | True | trnaa-agc_15 |
| trnaa-agc_14 | other | upstream | 1634684 | 6036802 ~ 6036874 (+) | True | trnaa-agc_14 |
| TU96351 | other | upstream | 2165920 | 5499908 ~ 5505638 (+) | True | G71414 |
| TU97487 | other | downstream | 1468236 | 9142899 ~ 9149419 (+) | True | G72281 |
| TU97933 | other | downstream | 2403916 | 10078579 ~ 10082140 (+) | True | G72621 |
| trnar-ucg_4 | other | downstream | 4928689 | 12603352 ~ 12603424 (+) | True | trnar-ucg_4 |
| XR_002650241.1 | other | downstream | 5196821 | 12871484 ~ 12897931 (+) | False | LOC103043719 |
| TU99159 | other | downstream | 6974166 | 14648829 ~ 14649551 (+) | True | G73533 |
