Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_015603201.2 |
| length | 769 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 6 |
| gene id | rps5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035904.1 |
| NCBI id | CM008307.1 |
| chromosome length | 27092187 |
| location | 975095 ~ 982603 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02989 | RP-S5e, RPS5; small subunit ribosomal protein S5e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU95096 | lncRNA | downstream | 60846 | 913078 ~ 914249 (-) | True | G70477 |
| TU95073 | lncRNA | downstream | 121490 | 845038 ~ 853605 (-) | True | G70457 |
| TU95070 | lncRNA | downstream | 134941 | 836229 ~ 840154 (-) | True | G70455 |
| TU95068 | lncRNA | downstream | 146539 | 826913 ~ 828556 (-) | True | G70454 |
| TU95050 | lncRNA | downstream | 193402 | 780327 ~ 781693 (-) | False | G70443 |
| TU95109 | lncRNA | upstream | 38132 | 1020735 ~ 1020992 (-) | True | G70489 |
| TU95110 | lncRNA | upstream | 50286 | 1032889 ~ 1035006 (-) | False | LOC103042850 |
| TU95122 | lncRNA | upstream | 105240 | 1087843 ~ 1088144 (-) | True | G70502 |
| TU95132 | lncRNA | upstream | 133324 | 1115927 ~ 1117269 (-) | True | G70508 |
| TU95137 | lncRNA | upstream | 163180 | 1145783 ~ 1146014 (-) | True | G70512 |
| XM_022671888.1 | mRNA | downstream | 36911 | 932017 ~ 938184 (-) | True | LOC111193040 |
| XM_022671930.1 | mRNA | downstream | 778812 | 178319 ~ 196283 (-) | True | LOC103044579 |
| XM_022671898.1 | mRNA | upstream | 5843 | 988446 ~ 1005877 (-) | True | LOC103041113 |
| XM_022671899.1 | mRNA | upstream | 27283 | 1009886 ~ 1035016 (-) | True | LOC103042850 |
| XM_022671943.1 | mRNA | upstream | 1015553 | 1998156 ~ 2220364 (-) | True | LOC103026956 |
| XM_022671944.1 | mRNA | upstream | 1453077 | 2435680 ~ 2488996 (-) | True | LOC103026657 |
| XM_022671945.1 | mRNA | upstream | 1518385 | 2500988 ~ 2535981 (-) | True | LOC103022920 |
| TU95334 | other | upstream | 1753265 | 2735868 ~ 2745072 (-) | False | tnip1 |
| TU95670 | other | upstream | 2365197 | 3347800 ~ 3353599 (-) | True | G70924 |
| TU95798 | other | upstream | 2786558 | 3769161 ~ 3807099 (-) | False | LOC103042226 |
| TU96020 | other | upstream | 3429345 | 4411948 ~ 4413011 (-) | True | G71175 |
| TU96095 | other | upstream | 3899567 | 4882170 ~ 4884488 (-) | True | G71235 |
