RNA id: XM_022672187.1


Basic Information

Item Value
RNA id XM_022672187.1
length 3216
RNA type mRNA
GC content 0.49
exon number 27
gene id ano3
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 15460687 ~ 15543780 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ATGTACGCTGCCTGGTTTATACGAGTGCGGATTTTTACTAACCTTGGAACTCACCCGACCGCCACGATGGTTCACCACTCCGGATCCATACAGTCCTTCAAGCAGCAGAACAAGGGCATGCACACCAGTATTAGCGAGATACTGAAGGAGAAGACCCTGAAGCCATCTCGTCGCAGTCTGCCCTGTCTGGCTCAGAGTCAGACACATCCTCACAACCTCAACCACTTCCTCTCTGTGCCTCTGAGTCCGGAGCCCAAAGCAGACACAAACACCCACAGCGTCAGTGCCTCCTGCACACACATCACCACTCCAACCACAGATACAAGTAAGGATCAGTATGCTGAGGAGATGGAGACAGGAGCATATGAGTCCAGAGCAGACGAATCTTTCCTCATCCAGCAGAAGCCGGTTTCCAGAGGCAAGCTGGAGGCTCGTGCAGACTCTGTCCGGGGGAATAATCCTGCCATCCCTTCTGGACTCACGTTTCGAGATGGGAAGAAGCGTATTGATTATATCCTGGTGTATAAGAAGTCCAGCCCTCAGGTTGAGAAGAGATGTACATTCGAGAGGAACTTGCGTGGAGGACTGATGCTTGAGAAAGAGCCCTCTCTGACCAATAATGACATCATGTTCGTGAAGATACATGCTCCATGGGACACGTTATGTAAATATGCAGAGCAAATGAACATCAGAATGCCTTTCAGGAAAAAGTGCTACTTCTCAGACTGGAAGAAGAAAACCTTGGGCAGtCGCTTTCATCTGAGATGCCGTCAGGTGAAAAGTTGGCTGCCGAGGAACCCAATGAAGCTGGATAAAGAGGCTCTGCCTGATCTGGAGGAGTCAGACTGCTACACCGCCCCCTTCAGCAGAGCCAGAATGCACCATTTTACCATCAACAACAGAGATTCATTCTTCTccaactccaccagaagcagaATAGTGCATCATGTTCTACAGCGCACCAAGTACGAGGACGGCAAGTCAAAGATGGGTATAAATCGGTTGCTTGGCAATGGCACCTATGAAGCTGCGTTTCCCCCACATGAGGGAAGCTACAAAAGCAGGCACCCGATAAAGACCCACGGGGCTCAGAACCACAGGCACCTGCTCTACGAGAGATGGGCTCGCTGGGGAATCTGGTACAAGTACCAGCCCCTGGACCTCATACGgAGGTATTTTGGGGAGAAGATAGGTCTGTATTTTGCATGGCTGGGCTGGTACACAGGCATGCTGATCCCGGCAGCACTGGTTGGTCTTTTTGTCTTCCTTTATGGCCTTTTCACCATGGACTCCAGCCAAGTGAGTAAAGAGATCTGTGAGGCCAACACCACCATCATGTGCCCCATGTGTGAAGTCAACTGCAGCGCCTGGAAATTAAGTGACAGCTGCGTCTATGcaaagGTGACTCATCTTTTTGACAATGGAGGCACAGTCTTCTTTGCCATCTTCATGGCTATATGGGCCACTGTCTTCCTTGAATTCTGGAAGAGAAGAAGGGCGGAGCTTACCTACGACTGGGATTTAATTGACTGGGAGGAGGAAGAGGAGGAACTGCGGCCTCAGTTCGAAGCCAAGTACTCGCGGAAGGAGAGAGTGAACCCCGTCTCAGGCAAACCAGAGCCTTTCCAGCCCTTCACCGACAAACTCAGCCGCCTCATGGTCTCGGTGTCTGGAATCTTCTTCATGatCTCTCTGGTGTTGACAGCTGTGTTCGCTGTGGTGGTTTTTCGGCTGATTGCCATGGAGAAGTTTGCCTCCTTCCAGTGGGAGTTTGTGAAGAAGAACTGGCAGTTTGCCACCTCTGGCACCGGAGTCTGCATTAACTTCATGATCATCATGTCCCTCAATGTGGTTTATGAGAAAGTGGCCTATCTGCTGACGAATCTGGAACACCCACGGACCGAGTCAGAATGGGAGAACAGCTTTGCCCTCAAGATGTTCCTTTTCCAGTTTGTCAACCTGAACAGCTCCACTTTCTACATAGCGTTCTTCTTGGGAAGGTTTGCTGGCAGGCCCGGAGACTATAATAAGCTGTTTAACCGCTGGAGAATGGAGGAGTGTCATCCCAGCGGTTGTCTTATTGATTTGTGCCTGCAAATGGGAGTGATCATGGTGCTGAAGCAAATCTGGAACAACTTCATGGAGCTGGGCTATCCGCTTCTTCAGAACTGGTGGTCCCGGCGCAAGATGAGGCGAGCAGGAGAGCAGAATAATGTGGAGTGTAAAGAAAAGATGCCTCAGTGGGACAAAGACTGGAACCTGCAGCCTATGAACGCCCATGGCCTGGTGGACGAGTACCTGGAGATGGTTCTTCAGTTCGGGTTCACCACCATCTTCGTGGCAGCATTTCCTCTGGCTCCTCTGCTGGCTCTGCTCAACAACATCATAGAGATCAGACTGGATGCATACAAGTTTGTGACGCAGTGGAGGAGACCCATGCCGGCTAGAGCAACTGATATTGGTATCTGGCATGGTATCCTGGAGGGCATTGGAGTGGTGGCTGTCATTACAAATGCCTTTGTCATCGCCATCACCTCTGACTATATTCCTCGCTTTGTGTATGCCTTCAAATATGGGCCCTGTGTGGACAAGGGCTACCGGCATGAAcaATGCCTGAGAGGATATATGAACAGTAGCCTGTCTGTGTTTGATATGGGTGAGCCACAGAATGAAAGTCAGTATCAGACACGATACTGCAGATATCGGGACTACAGAGCACCGCCGTGGAGCTCAGAGCCCTACGAGTTCACCCTGCAGTTCTGGCACGTACTCGCCGCCAGACTGGCCTTCATCATCGTCTTCGAGGTGAGTGATTTACAGATTGACTCTCCACAGCAGTCAGGATCTAAGGTTATTTGGGGTATCCCTTTAAATTTTAAGGGCTTGCGTGTATgtccacattatgattatttattttataccttACATACTGTTATTGTTATAGTCAGTGAATTAATCATTTGTGTTAGTTAATAATGTCTACTAATTAGTCCAGTCTTATAACTGATGAATTAGTCCTGTTACAAACTGTGTTGATACATTAGACCTgcaatattaatacattatagTGTAGTAGAAGATGgtaaatacactatatggacaataGTATAGAgaaggggtgtgacgagacctCGGGCCatgtcaggtgttaaatgtgtctgATACAGTTATGCACAGGTAACGAAAACATATGTTTGGCAATTTGGGAAACGAAAA

Function

GO: NA

KEGG:

id description
K19498 ANO3, TMEM16C; anoctamin-3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99604 lncRNA downstream 6077 15449504 ~ 15454610 (-) False G73869
TU99603 lncRNA downstream 6861 15449504 ~ 15453826 (-) True G73869
TU99596 lncRNA downstream 29380 15430147 ~ 15431307 (-) True G73862
TU99585 lncRNA downstream 46074 15386679 ~ 15414613 (-) False LOC103040324
XR_002650247.1 lncRNA downstream 142600 15314637 ~ 15318087 (-) True LOC111193098
TU99622 lncRNA upstream 28554 15572334 ~ 15577498 (-) True G73877
TU99658 lncRNA upstream 100041 15643821 ~ 15644252 (-) True G73910
TU99834 lncRNA upstream 309522 15853302 ~ 15953813 (-) True LOC111193099
XR_002650249.1 lncRNA upstream 383704 15927484 ~ 15952104 (-) False LOC111193099
TU99883 lncRNA upstream 559836 16103616 ~ 16108725 (-) True G74091
XM_007228222.3 mRNA downstream 26662 15431473 ~ 15434025 (-) True fibin
XM_007228217.3 mRNA downstream 65546 15381329 ~ 15395141 (-) False LOC103040324
XM_007228216.3 mRNA downstream 65550 15381329 ~ 15395137 (-) True LOC103040324
XM_007228214.3 mRNA downstream 169975 15228039 ~ 15290712 (-) True LOC103038669
XM_007228223.3 mRNA upstream 20191 15563971 ~ 15571540 (-) False LOC103042382
XM_022672190.1 mRNA upstream 20191 15563971 ~ 15571531 (-) True LOC103042382
XM_007228225.3 mRNA upstream 22602 15566382 ~ 15571540 (-) False LOC103042382
XM_007228227.3 mRNA upstream 37256 15581036 ~ 15621857 (-) True gas2
XM_022672191.1 mRNA upstream 37256 15581036 ~ 15613016 (-) False gas2
TU99163 other downstream 915249 14542209 ~ 14545438 (-) False LOC103025073
TU98709 other downstream 2839331 12610834 ~ 12621356 (-) True G73172
TU98667 other downstream 2895721 12564348 ~ 12564966 (-) False fbxo31
TU98668 other downstream 2895813 12564348 ~ 12564874 (-) False fbxo31
TU98666 other downstream 2895889 12564348 ~ 12564798 (-) False fbxo31
XR_002650248.1 other upstream 217984 15761764 ~ 15778423 (-) False LOC103046265
TU100463 other upstream 2333246 17877026 ~ 17883786 (-) False nrg4
TU100498 other upstream 2438967 17982747 ~ 18029747 (-) True G74591
TU100745 other upstream 3395394 18939174 ~ 18940464 (-) True G74791
TU100809 other upstream 3527158 19070938 ~ 19072888 (-) True G74838

Expression Profile