Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU16104 |
| length | 418 |
| RNA type | TUCP |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G11917 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 19998440 ~ 20082442 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko03420 | Nucleotide excision repair |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15984 | lncRNA | downstream | 220725 | 19773629 ~ 19777715 (-) | True | G11821 |
| TU15957 | lncRNA | downstream | 329198 | 19666960 ~ 19669242 (-) | True | G11801 |
| TU15962 | lncRNA | downstream | 329927 | 19639485 ~ 19668513 (-) | False | G11801 |
| TU15961 | lncRNA | downstream | 329927 | 19666960 ~ 19668513 (-) | False | G11801 |
| TU15938 | lncRNA | downstream | 448561 | 19549678 ~ 19549879 (-) | True | G11790 |
| TU16130 | lncRNA | upstream | 138703 | 20221145 ~ 20222103 (-) | True | G11938 |
| TU16213 | lncRNA | upstream | 431119 | 20513561 ~ 20513760 (-) | True | G12018 |
| TU16328 | lncRNA | upstream | 606893 | 20689335 ~ 20723912 (-) | True | G12115 |
| TU16332 | lncRNA | upstream | 638200 | 20720642 ~ 20731920 (-) | True | G12118 |
| TU16334 | lncRNA | upstream | 646201 | 20728643 ~ 20755287 (-) | True | G12120 |
| XM_007260554.3 | mRNA | downstream | 196117 | 19786123 ~ 19802323 (-) | False | jam3 |
| XM_015608653.2 | mRNA | downstream | 214800 | 19777857 ~ 19783640 (-) | False | vps26b |
| XM_007260553.2 | mRNA | downstream | 214805 | 19777857 ~ 19783635 (-) | True | vps26b |
| XM_022674751.1 | mRNA | downstream | 225824 | 19764372 ~ 19772616 (-) | True | acad8 |
| XM_022674736.1 | mRNA | downstream | 357360 | 19575806 ~ 19641080 (-) | True | LOC103024723 |
| XM_022677893.1 | mRNA | upstream | 830152 | 20912594 ~ 20943980 (-) | True | dixdc1 |
| XM_007231430.3 | mRNA | upstream | 1130791 | 21213233 ~ 21219097 (-) | True | LOC103030049 |
| XM_022674963.1 | mRNA | upstream | 1235059 | 21317501 ~ 21450195 (-) | True | sorl1 |
| XM_022674978.1 | mRNA | upstream | 1374689 | 21457131 ~ 21465432 (-) | True | bco2 |
| XM_022675004.1 | mRNA | upstream | 1391970 | 21474412 ~ 21482404 (-) | True | sdhd |
| TU16077 | other | downstream | 196227 | 19785981 ~ 19802213 (-) | True | jam3 |
| trnap-cgg | other | downstream | 759463 | 19238906 ~ 19238977 (-) | True | trnap-cgg |
| TU15837 | other | downstream | 886868 | 19108713 ~ 19111572 (-) | True | G11719 |
| XR_454920.3 | other | downstream | 3644606 | 16323033 ~ 16353834 (-) | False | LOC103036671 |
| XR_002650881.1 | other | downstream | 4096007 | 15762347 ~ 15902433 (-) | False | LOC103030038 |
| trnak-cuu | other | upstream | 892640 | 20975082 ~ 20975154 (-) | True | trnak-cuu |
| TU17143 | other | upstream | 1911365 | 21993807 ~ 21994751 (-) | True | G12767 |
| XR_002650646.1 | other | upstream | 3456815 | 23539257 ~ 23553970 (-) | False | LOC111193708 |
| XR_002650645.1 | other | upstream | 3458892 | 23541334 ~ 23553970 (-) | True | LOC111193708 |
| TU17895 | other | upstream | 3702029 | 23784471 ~ 23803818 (-) | False | LOC103035686 |
