Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU16621 |
| length | 897 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G12369 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 21471007 ~ 21471993 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0003884 | D-amino-acid oxidase activity | molecular_function |
| GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16571 | lncRNA | upstream | 143976 | 21326410 ~ 21327031 (+) | True | G12328 |
| TU16565 | lncRNA | upstream | 147282 | 21322038 ~ 21323725 (+) | True | G12325 |
| TU16546 | lncRNA | upstream | 157494 | 21312656 ~ 21313513 (+) | True | G12307 |
| TU16536 | lncRNA | upstream | 161689 | 21263927 ~ 21309318 (+) | True | G12297 |
| TU16477 | lncRNA | upstream | 299689 | 21171105 ~ 21171318 (+) | True | G12242 |
| TU16623 | lncRNA | downstream | 622 | 21472615 ~ 21475035 (+) | True | G12370 |
| TU16628 | lncRNA | downstream | 11120 | 21483113 ~ 21498147 (+) | False | G12373 |
| TU16630 | lncRNA | downstream | 11120 | 21483113 ~ 21519233 (+) | True | G12373 |
| TU16636 | lncRNA | downstream | 28204 | 21500197 ~ 21531538 (+) | True | G12379 |
| TU16677 | lncRNA | downstream | 138179 | 21610172 ~ 21613000 (+) | True | G12410 |
| XM_022674940.1 | mRNA | upstream | 417152 | 20994106 ~ 21053855 (+) | True | LOC103033418 |
| XM_022674932.1 | mRNA | upstream | 480943 | 20966272 ~ 20990064 (+) | True | LOC103033739 |
| XM_007231431.3 | mRNA | upstream | 510771 | 20951343 ~ 20960236 (+) | True | LOC103030893 |
| XM_022674920.1 | mRNA | upstream | 510771 | 20952512 ~ 20960236 (+) | False | LOC103030893 |
| XM_015600779.2 | mRNA | upstream | 562200 | 20902276 ~ 20908807 (+) | True | pih1d2 |
| XM_007229377.3 | mRNA | downstream | 72363 | 21544356 ~ 21549087 (+) | True | nkapd1 |
| XM_007229378.3 | mRNA | downstream | 102957 | 21574950 ~ 21597352 (+) | True | LOC103031614 |
| XM_022677900.1 | mRNA | downstream | 292965 | 21764958 ~ 21827382 (+) | True | LOC111194279 |
| XM_022675083.1 | mRNA | downstream | 372772 | 21844765 ~ 21905395 (+) | True | ttc12 |
| XM_022675089.1 | mRNA | downstream | 379043 | 21851036 ~ 21905395 (+) | False | ttc12 |
| TU16611 | other | upstream | 7358 | 21459850 ~ 21463649 (+) | True | G12362 |
| trnan-guu | other | upstream | 494730 | 20976204 ~ 20976277 (+) | True | trnan-guu |
| TU16384 | other | upstream | 498913 | 20963049 ~ 20972094 (+) | False | LOC103033739 |
| TU16383 | other | upstream | 498913 | 20966288 ~ 20972094 (+) | False | LOC103033739 |
| TU15744 | other | upstream | 2046943 | 19412844 ~ 19424064 (+) | False | LOC103043893 |
| TU16873 | other | downstream | 857726 | 22329719 ~ 22341513 (+) | False | spa17 |
| TU16874 | other | downstream | 857726 | 22329719 ~ 22384972 (+) | False | spa17 |
| TU16886 | other | downstream | 1001659 | 22473652 ~ 22512636 (+) | False | oaf |
| TU17542 | other | downstream | 2382005 | 23853998 ~ 23855353 (+) | True | G13067 |
| TU17745 | other | downstream | 3242358 | 24714351 ~ 24717226 (+) | False | ccdc9 |
