Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU16665 |
| length | 302 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G12400 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 21532480 ~ 21538280 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650613.1 | lncRNA | downstream | 215775 | 21314598 ~ 21316705 (-) | True | LOC111193576 |
| TU16594 | lncRNA | downstream | 215803 | 21312672 ~ 21316677 (-) | False | LOC111193576 |
| TU16435 | lncRNA | downstream | 570721 | 20960778 ~ 20961759 (-) | True | G12203 |
| TU16347 | lncRNA | downstream | 603263 | 20840206 ~ 20929217 (-) | False | G12131 |
| TU16346 | lncRNA | downstream | 688224 | 20840206 ~ 20844256 (-) | True | G12131 |
| TU16671 | lncRNA | upstream | 31678 | 21569958 ~ 21570232 (-) | True | G12405 |
| TU16660 | lncRNA | upstream | 36678 | 21574958 ~ 21578572 (-) | True | G12397 |
| TU16659 | lncRNA | upstream | 43282 | 21581562 ~ 21599012 (-) | True | G12396 |
| TU17103 | lncRNA | upstream | 146932 | 21685212 ~ 21688855 (-) | True | G12739 |
| TU17104 | lncRNA | upstream | 156090 | 21694370 ~ 21694794 (-) | True | G12740 |
| XM_022677703.1 | mRNA | downstream | 1735 | 21518007 ~ 21530745 (-) | True | LOC103034230 |
| XM_015604411.2 | mRNA | downstream | 21274 | 21496598 ~ 21511206 (-) | True | LOC103030662 |
| XM_007229376.3 | mRNA | downstream | 41358 | 21483571 ~ 21491122 (-) | True | LOC103030984 |
| XM_022675004.1 | mRNA | downstream | 50076 | 21474412 ~ 21482404 (-) | True | sdhd |
| XM_022674978.1 | mRNA | downstream | 67048 | 21457131 ~ 21465432 (-) | True | bco2 |
| XM_022675039.1 | mRNA | upstream | 71874 | 21610154 ~ 21699039 (-) | False | LOC103031934 |
| XM_022675044.1 | mRNA | upstream | 71874 | 21610154 ~ 21690408 (-) | True | LOC103031934 |
| XM_022675047.1 | mRNA | upstream | 167933 | 21706213 ~ 21720284 (-) | False | LOC107197401 |
| XM_022675046.1 | mRNA | upstream | 167933 | 21706213 ~ 21720284 (-) | True | LOC107197401 |
| XM_015604418.2 | mRNA | upstream | 209140 | 21747420 ~ 21752895 (-) | False | LOC103032573 |
| trnak-cuu | other | downstream | 557326 | 20975082 ~ 20975154 (-) | True | trnak-cuu |
| TU16104 | other | downstream | 1450038 | 19998440 ~ 20082442 (-) | True | G11917 |
| TU16077 | other | downstream | 1730267 | 19785981 ~ 19802213 (-) | True | jam3 |
| trnap-cgg | other | downstream | 2293503 | 19238906 ~ 19238977 (-) | True | trnap-cgg |
| TU15837 | other | downstream | 2420908 | 19108713 ~ 19111572 (-) | True | G11719 |
| TU17143 | other | upstream | 455527 | 21993807 ~ 21994751 (-) | True | G12767 |
| XR_002650646.1 | other | upstream | 2000977 | 23539257 ~ 23553970 (-) | False | LOC111193708 |
| XR_002650645.1 | other | upstream | 2003054 | 23541334 ~ 23553970 (-) | True | LOC111193708 |
| TU17895 | other | upstream | 2246191 | 23784471 ~ 23803818 (-) | False | LOC103035686 |
| TU17900 | other | upstream | 2365903 | 23904183 ~ 23908771 (-) | True | G13322 |
