Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU17125 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 3 |
| gene id | G12749 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 21797969 ~ 21852060 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17120 | lncRNA | downstream | 42506 | 21754671 ~ 21755463 (-) | True | G12746 |
| TU17100 | lncRNA | downstream | 92121 | 21704259 ~ 21705848 (-) | True | G12736 |
| TU17104 | lncRNA | downstream | 103175 | 21694370 ~ 21694794 (-) | True | G12740 |
| TU17103 | lncRNA | downstream | 109114 | 21685212 ~ 21688855 (-) | True | G12739 |
| TU16659 | lncRNA | downstream | 198957 | 21581562 ~ 21599012 (-) | True | G12396 |
| TU17146 | lncRNA | upstream | 85725 | 21937785 ~ 21967799 (-) | True | G12768 |
| TU17147 | lncRNA | upstream | 125281 | 21977341 ~ 21982608 (-) | True | G12769 |
| TU17149 | lncRNA | upstream | 127714 | 21979774 ~ 21982608 (-) | False | G12769 |
| TU17150 | lncRNA | upstream | 127714 | 21979774 ~ 21982608 (-) | False | G12769 |
| TU17151 | lncRNA | upstream | 127714 | 21979774 ~ 21982608 (-) | False | G12769 |
| XM_015604418.2 | mRNA | downstream | 45074 | 21747420 ~ 21752895 (-) | False | LOC103032573 |
| XM_015604417.2 | mRNA | downstream | 45075 | 21747420 ~ 21752894 (-) | True | LOC103032573 |
| XM_022675047.1 | mRNA | downstream | 77685 | 21706213 ~ 21720284 (-) | False | LOC107197401 |
| XM_022675046.1 | mRNA | downstream | 77685 | 21706213 ~ 21720284 (-) | True | LOC107197401 |
| XM_022675039.1 | mRNA | downstream | 98930 | 21610154 ~ 21699039 (-) | False | LOC103031934 |
| XM_022675103.1 | mRNA | upstream | 132374 | 21984434 ~ 22058836 (-) | True | LOC103036974 |
| XM_022675122.1 | mRNA | upstream | 289710 | 22141770 ~ 22164569 (-) | True | scn3b |
| XM_022675126.1 | mRNA | upstream | 289710 | 22141770 ~ 22164549 (-) | False | scn3b |
| XM_022675116.1 | mRNA | upstream | 289710 | 22141770 ~ 22164548 (-) | False | scn3b |
| XM_022675114.1 | mRNA | upstream | 327356 | 22179416 ~ 22191537 (-) | True | LOC103032877 |
| trnak-cuu | other | downstream | 822815 | 20975082 ~ 20975154 (-) | True | trnak-cuu |
| TU16104 | other | downstream | 1715527 | 19998440 ~ 20082442 (-) | True | G11917 |
| TU16077 | other | downstream | 1995756 | 19785981 ~ 19802213 (-) | True | jam3 |
| trnap-cgg | other | downstream | 2558992 | 19238906 ~ 19238977 (-) | True | trnap-cgg |
| TU15837 | other | downstream | 2686397 | 19108713 ~ 19111572 (-) | True | G11719 |
| TU17143 | other | upstream | 141747 | 21993807 ~ 21994751 (-) | True | G12767 |
| XR_002650646.1 | other | upstream | 1687197 | 23539257 ~ 23553970 (-) | False | LOC111193708 |
| XR_002650645.1 | other | upstream | 1689274 | 23541334 ~ 23553970 (-) | True | LOC111193708 |
| TU17895 | other | upstream | 1932411 | 23784471 ~ 23803818 (-) | False | LOC103035686 |
| TU17900 | other | upstream | 2052123 | 23904183 ~ 23908771 (-) | True | G13322 |
