Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU18751 |
| length | 1114 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G13963 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 26676771 ~ 26677906 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0052652 | cyclic purine nucleotide metabolic process | biological_process |
| GO:0046068 | cGMP metabolic process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0006182 | cGMP biosynthetic process | biological_process |
| GO:0003008 | system process | biological_process |
| GO:0009187 | cyclic nucleotide metabolic process | biological_process |
| GO:0009190 | cyclic nucleotide biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18522 | lncRNA | downstream | 365021 | 26311435 ~ 26311750 (-) | True | G13801 |
| TU18473 | lncRNA | downstream | 670091 | 26002331 ~ 26006680 (-) | False | nars2 |
| TU18477 | lncRNA | downstream | 700788 | 25971405 ~ 25975983 (-) | True | G13769 |
| TU18382 | lncRNA | downstream | 918737 | 25755941 ~ 25758034 (-) | True | G13685 |
| TU18327 | lncRNA | downstream | 1152475 | 25523787 ~ 25524296 (-) | False | LOC111193738 |
| TU18925 | lncRNA | upstream | 259970 | 26937876 ~ 26962565 (-) | True | G14112 |
| TU18923 | lncRNA | upstream | 283820 | 26961726 ~ 26962565 (-) | False | G14112 |
| TU18945 | lncRNA | upstream | 285736 | 26963642 ~ 26964693 (-) | True | G14125 |
| TU18961 | lncRNA | upstream | 367602 | 27045508 ~ 27046047 (-) | True | G14130 |
| TU18962 | lncRNA | upstream | 368963 | 27046869 ~ 27047115 (-) | True | G14131 |
| XM_022675652.1 | mRNA | downstream | 376843 | 26050978 ~ 26299928 (-) | False | tenm4 |
| XM_022675646.1 | mRNA | downstream | 376843 | 26050978 ~ 26299928 (-) | False | tenm4 |
| XM_022675682.1 | mRNA | downstream | 376844 | 26048861 ~ 26299927 (-) | False | tenm4 |
| XM_007237658.3 | mRNA | upstream | 35102 | 26713008 ~ 26724170 (-) | True | LOC111188176 |
| XM_022675705.1 | mRNA | upstream | 56702 | 26734608 ~ 26768101 (-) | True | gak |
| XM_022675710.1 | mRNA | upstream | 95124 | 26773030 ~ 26817911 (-) | False | sh2b3 |
| XM_022675713.1 | mRNA | upstream | 95124 | 26773030 ~ 26805159 (-) | True | sh2b3 |
| XM_022677967.1 | mRNA | upstream | 146950 | 26824856 ~ 26833613 (-) | True | fam109a |
| TU18474 | other | downstream | 660375 | 26007242 ~ 26016396 (-) | False | nars2 |
| TU18373 | other | downstream | 950615 | 25724913 ~ 25726156 (-) | True | G13677 |
| TU18307 | other | downstream | 1182319 | 25473734 ~ 25494452 (-) | True | G13630 |
| TU17900 | other | downstream | 2768000 | 23904183 ~ 23908771 (-) | True | G13322 |
| TU17895 | other | downstream | 2872953 | 23784471 ~ 23803818 (-) | False | LOC103035686 |
| TU18746 | other | upstream | 375 | 26678281 ~ 26698793 (-) | False | G13960 |
| TU18787 | other | upstream | 152115 | 26830021 ~ 26833598 (-) | False | fam109a |
| TU18929 | other | upstream | 221099 | 26899005 ~ 26902713 (-) | True | G14113 |
| TU18930 | other | upstream | 221099 | 26899005 ~ 26902713 (-) | False | G14113 |
| TU18940 | other | upstream | 345607 | 27023513 ~ 27029917 (-) | False | fam214b |
