Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022675872.1 |
| length | 1286 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | carhsp1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 28749534 ~ 28796458 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19313 | lncRNA | downstream | 38481 | 28697362 ~ 28715283 (-) | True | G14394 |
| TU19218 | lncRNA | downstream | 122950 | 28630590 ~ 28630814 (-) | True | G14339 |
| TU19212 | lncRNA | downstream | 203060 | 28550453 ~ 28550704 (-) | True | G14333 |
| TU19206 | lncRNA | downstream | 216574 | 28519571 ~ 28537190 (-) | True | G14330 |
| TU19184 | lncRNA | downstream | 562295 | 28191074 ~ 28191469 (-) | True | G14312 |
| XR_002650746.1 | lncRNA | upstream | 16583 | 28813041 ~ 28815878 (-) | True | LOC111193842 |
| TU19337 | lncRNA | upstream | 102895 | 28899353 ~ 28900100 (-) | True | G14415 |
| TU19338 | lncRNA | upstream | 102895 | 28899353 ~ 28900100 (-) | False | G14415 |
| TU19334 | lncRNA | upstream | 107303 | 28903761 ~ 28924250 (-) | True | G14412 |
| TU19340 | lncRNA | upstream | 154287 | 28950745 ~ 28951228 (-) | True | G14417 |
| XM_007245546.3 | mRNA | downstream | 91462 | 28633776 ~ 28662302 (-) | True | tmem114 |
| XM_022675825.1 | mRNA | downstream | 728963 | 27852176 ~ 28024801 (-) | True | LOC103034330 |
| XM_022675832.1 | mRNA | downstream | 812930 | 27852176 ~ 27940834 (-) | False | LOC103034330 |
| XM_022675828.1 | mRNA | downstream | 818470 | 27852176 ~ 27935294 (-) | False | LOC103034330 |
| XM_022675793.1 | mRNA | downstream | 1124518 | 27604572 ~ 27629246 (-) | True | LOC103033698 |
| XM_007245549.3 | mRNA | upstream | 5632 | 28802090 ~ 28812124 (-) | True | naa60 |
| XM_022675901.1 | mRNA | upstream | 25510 | 28821968 ~ 28829514 (-) | True | eci1 |
| XM_007245554.2 | mRNA | upstream | 108603 | 28905061 ~ 28933768 (-) | True | clcn7 |
| XM_022677733.1 | mRNA | upstream | 138168 | 28934626 ~ 28943090 (-) | True | ptx4 |
| XM_007245558.3 | mRNA | upstream | 170027 | 28966485 ~ 28995105 (-) | False | usp7 |
| TU18940 | other | downstream | 1723847 | 27023513 ~ 27029917 (-) | False | fam214b |
| TU18929 | other | downstream | 1851051 | 26899005 ~ 26902713 (-) | True | G14113 |
| TU18930 | other | downstream | 1851051 | 26899005 ~ 26902713 (-) | False | G14113 |
| TU18787 | other | downstream | 1920166 | 26830021 ~ 26833598 (-) | False | fam109a |
| TU18746 | other | downstream | 2054971 | 26678281 ~ 26698793 (-) | False | G13960 |
| TU19514 | other | upstream | 817154 | 29613612 ~ 29643303 (-) | False | emp2 |
| TU19553 | other | upstream | 961229 | 29757687 ~ 29761226 (-) | False | dexi |
| TU19597 | other | upstream | 1092777 | 29889235 ~ 29890576 (-) | False | LOC111193878 |
| TU19677 | other | upstream | 1464560 | 30261018 ~ 30268350 (-) | True | rps15a |
| TU19826 | other | upstream | 2093148 | 30889606 ~ 30892648 (-) | False | LOC103045124 |
