Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU20526 |
| length | 695 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 3 |
| gene id | hopx |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 32814048 ~ 32820804 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20538 | lncRNA | downstream | 18244 | 32795378 ~ 32795830 (-) | True | G15249 |
| TU20532 | lncRNA | downstream | 19732 | 32784189 ~ 32794342 (-) | True | G15244 |
| TU20531 | lncRNA | downstream | 19732 | 32792855 ~ 32794342 (-) | False | G15244 |
| XR_455730.2 | lncRNA | downstream | 47509 | 32766097 ~ 32766565 (-) | True | LOC103032939 |
| TU20517 | lncRNA | downstream | 97176 | 32716630 ~ 32716898 (-) | True | G15233 |
| TU20564 | lncRNA | upstream | 78256 | 32897427 ~ 32912129 (-) | False | G15273 |
| TU20562 | lncRNA | upstream | 86858 | 32906029 ~ 32908135 (-) | True | G15272 |
| TU20563 | lncRNA | upstream | 90210 | 32909381 ~ 32912129 (-) | True | G15273 |
| TU20567 | lncRNA | upstream | 93058 | 32912229 ~ 32913566 (-) | True | G15276 |
| TU20586 | lncRNA | upstream | 152366 | 32971537 ~ 32973457 (-) | True | G15289 |
| XM_022676449.1 | mRNA | downstream | 63309 | 32734285 ~ 32750765 (-) | True | LOC103031569 |
| XM_022676427.1 | mRNA | downstream | 155424 | 32649063 ~ 32658650 (-) | True | rest |
| XM_022676418.1 | mRNA | downstream | 175156 | 32622181 ~ 32638918 (-) | True | polr2b |
| XM_007245610.3 | mRNA | downstream | 641134 | 32160819 ~ 32172940 (-) | False | LOC103039786 |
| XM_022676502.1 | mRNA | upstream | 15325 | 32834496 ~ 32858295 (-) | False | LOC103039156 |
| XM_022676496.1 | mRNA | upstream | 15325 | 32834496 ~ 32858295 (-) | True | LOC103039156 |
| XM_007260318.3 | mRNA | upstream | 41512 | 32860683 ~ 32865337 (-) | True | LOC103029668 |
| XM_022676517.1 | mRNA | upstream | 101854 | 32921025 ~ 32943593 (-) | True | LOC103029347 |
| XM_007260314.2 | mRNA | upstream | 136960 | 32956131 ~ 32959840 (-) | True | LOC103028197 |
| TU20269 | other | downstream | 654196 | 32142728 ~ 32159878 (-) | False | nfkb1 |
| TU19927 | other | downstream | 1758571 | 31053764 ~ 31055503 (-) | True | G14839 |
| trnap-agg_1 | other | downstream | 1890127 | 30923876 ~ 30923947 (-) | False | trnap-agg_1 |
| TU19838 | other | downstream | 1890825 | 30914910 ~ 30923249 (-) | True | G14781 |
| TU19828 | other | downstream | 1921426 | 30889606 ~ 30892648 (-) | False | LOC103045124 |
| TU20934 | other | upstream | 1315421 | 34134592 ~ 34136732 (-) | True | G15497 |
| TU20928 | other | upstream | 1342952 | 34162123 ~ 34162958 (-) | False | evc2 |
| TU20930 | other | upstream | 1342952 | 34162123 ~ 34162958 (-) | False | evc2 |
| TU20938 | other | upstream | 1422155 | 34241326 ~ 34242318 (-) | True | G15498 |
