RNA id: TU20938


Basic Information

Item Value
RNA id TU20938
length 874
RNA type TUCP
GC content 0.43
exon number 2
gene id G15498
representative True

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34241326 ~ 34242318 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

cttcatcatcatcatcatcatcctcggTAAAAATGTAGTCCAGGAGGAAGGAAGCCATATCAGCCCTGAGAGTCTCATCTGCAGAAAAGCTCACACTCTGAGGCTCCGCCCCTCCGAACATCACCAACACATCACACAAACACTCAAACgcctgaaagagaaaaagagggagacagaaagtgggagagtgggagagagagagagagaaagaaagagggacacaaaaaatgaaagtgaaaaagaggaagacagaaagagagagagagagagagagaggagagagagagagagacctggtCTCGGACGTCACTCTGATCCAAAGGGAGGCAACTCTGACACACAGCGCAGAAAGAGCCAACCATTTTTTCCAGCTTCCTCAAACCAGCCTgagagaaagggggggggggatttatATATCAGCGCTGTGTGTATATCAGCGCTGTGTGTATATCAGCGCTGTGTGTATATCAGCGCTGTGTGTATATCAGCGCTGTGTGTATATCAGCGCTATGTGTATATCAGTGCTGTGTATATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGCGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTGTATATCAGCGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTTTATATCAGTGCTGTGTGTATATCAGCGCTGTGTGTATATCAGCGCTGTGTGTATATCAGTGCTGTGTGTATATCAGTGCTGTGTTTATATCAGTGCTATGTGTATATCAGCGCTGTGTGTATATCAGTGCTGTGTTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU20976 lncRNA downstream 6863 34233629 ~ 34234463 (-) True G15523
TU20972 lncRNA downstream 26030 34212863 ~ 34215296 (-) True G15519
TU20963 lncRNA downstream 46098 34194775 ~ 34195228 (-) True G15516
TU20958 lncRNA downstream 62759 34177201 ~ 34178567 (-) False G15513
TU20959 lncRNA downstream 63032 34177201 ~ 34178294 (-) True G15513
XM_022676810.1 mRNA downstream 13292 34219943 ~ 34228034 (-) True mcm7
XM_022676851.1 mRNA downstream 24999 34213764 ~ 34216327 (-) True LOC103041332
XM_022676864.1 mRNA downstream 42441 34191147 ~ 34198885 (-) True crmp1
XM_022676826.1 mRNA downstream 50932 34185628 ~ 34190394 (-) False LOC103038859
XM_022676821.1 mRNA downstream 50932 34185628 ~ 34190394 (-) True LOC103038859
TU20928 other downstream 78368 34162123 ~ 34162958 (-) False evc2
TU20930 other downstream 78368 34162123 ~ 34162958 (-) False evc2
TU20934 other downstream 104594 34134592 ~ 34136732 (-) True G15497
TU20525 other downstream 1420557 32814074 ~ 32820769 (-) False hopx
TU20526 other downstream 1422155 32814074 ~ 32819171 (-) False hopx

Expression Profile