RNA id: TU20944



Basic Information


Item Value
RNA id TU20944
length 490
lncRNA type read_through
GC content 0.44
exon number 3
gene id G15503
representative True

Chromosome Information


Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34201008 ~ 34253713 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gtgtgtgtgtatagtgtgtgtgtgtgtgttgtgtgtgtatagtgtgtgtagtgtgtgtatagtgtgtgtgtgtgtgtgtgtgtgtatagtgtgtgtagtgtgtgtatagtgtgtgtgtatagtgtgtgtgtgtgtgtagtgtgtgtgtgttactcacaCTGCTCCTCCTTGGTGTAGTAATACTCCTTGTCGATGTGAATTCGCTCGTCGGTCGTGTGAAACAGCAGCTCAAACGAGTTCATCACCTCGATATTCCTCCCCTCCTGCTTCCCTATCAGAGCTCCaatcactgcacacacacacacacacacacacatattctcatcctgtgtgattttattctcgtcCAGAATgatcatgtttgtgtttttctcaggctgaattatctactgttttttttctgaactccgtgctcctccggtaattttagtcccgtccggacgcacatctctgagtttaataaaataactatttgtccactgccatgcac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU20963 lncRNA downstream 5780 34194775 ~ 34195228 (-) True G15516
TU20958 lncRNA downstream 22441 34177201 ~ 34178567 (-) False G15513
TU20959 lncRNA downstream 22714 34177201 ~ 34178294 (-) True G15513
TU20953 lncRNA downstream 25630 34174200 ~ 34175378 (-) False G15512
TU20954 lncRNA downstream 25630 34174200 ~ 34175378 (-) True G15512
XM_022676864.1 mRNA downstream 2123 34191147 ~ 34198885 (-) True crmp1
XM_022676826.1 mRNA downstream 10614 34185628 ~ 34190394 (-) False LOC103038859
XM_022676821.1 mRNA downstream 10614 34185628 ~ 34190394 (-) True LOC103038859
XM_022676832.1 mRNA downstream 11621 34185628 ~ 34189387 (-) False LOC103038859
XM_022676839.1 mRNA downstream 12228 34185628 ~ 34188780 (-) False LOC103038859
TU20928 other downstream 38050 34162123 ~ 34162958 (-) False evc2
TU20930 other downstream 38050 34162123 ~ 34162958 (-) False evc2
TU20934 other downstream 64276 34134592 ~ 34136732 (-) True G15497
TU20526 other downstream 1381837 32814074 ~ 32819171 (-) False hopx

Expression Profile