Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007245599.2 |
| length | 798 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 2 |
| gene id | higd2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 31955606 ~ 31958456 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20186 | lncRNA | downstream | 75763 | 31877805 ~ 31879843 (-) | True | G15022 |
| TU20185 | lncRNA | downstream | 76158 | 31877805 ~ 31879448 (-) | False | G15022 |
| TU20187 | lncRNA | downstream | 76158 | 31877805 ~ 31879448 (-) | False | G15022 |
| TU20202 | lncRNA | downstream | 78645 | 31845182 ~ 31876961 (-) | True | G15037 |
| TU20188 | lncRNA | downstream | 334309 | 31529337 ~ 31621297 (-) | True | G15023 |
| TU20235 | lncRNA | upstream | 36177 | 31994633 ~ 31995062 (-) | True | G15063 |
| TU20251 | lncRNA | upstream | 74595 | 32033051 ~ 32040230 (-) | True | G15074 |
| TU20253 | lncRNA | upstream | 74595 | 32033051 ~ 32038565 (-) | False | G15074 |
| TU20256 | lncRNA | upstream | 74595 | 32033051 ~ 32040230 (-) | False | G15074 |
| TU20261 | lncRNA | upstream | 83885 | 32042341 ~ 32045045 (-) | True | G15078 |
| XM_022676307.1 | mRNA | downstream | 12309 | 31880794 ~ 31943297 (-) | False | pdlim7 |
| XM_022676290.1 | mRNA | downstream | 12309 | 31880794 ~ 31943297 (-) | False | pdlim7 |
| XM_022676287.1 | mRNA | downstream | 12316 | 31880794 ~ 31943290 (-) | False | pdlim7 |
| XM_022676277.1 | mRNA | downstream | 12317 | 31880794 ~ 31943289 (-) | True | pdlim7 |
| XM_022676280.1 | mRNA | downstream | 12317 | 31880794 ~ 31943289 (-) | False | pdlim7 |
| XM_007245601.3 | mRNA | upstream | 15136 | 31973592 ~ 31995512 (-) | False | rnf44 |
| XM_022676341.1 | mRNA | upstream | 15136 | 31973592 ~ 31990648 (-) | True | rnf44 |
| XM_022676347.1 | mRNA | upstream | 15136 | 31973592 ~ 31990641 (-) | False | rnf44 |
| XM_007245604.3 | mRNA | upstream | 87653 | 32046109 ~ 32055172 (-) | True | abhd18 |
| XM_022676379.1 | mRNA | upstream | 115710 | 32074166 ~ 32119158 (-) | True | dgkq |
| TU19927 | other | downstream | 900103 | 31053764 ~ 31055503 (-) | True | G14839 |
| trnap-agg_1 | other | downstream | 1031659 | 30923876 ~ 30923947 (-) | False | trnap-agg_1 |
| TU19838 | other | downstream | 1032357 | 30914910 ~ 30923249 (-) | True | G14781 |
| TU19827 | other | downstream | 1062958 | 30889606 ~ 30892648 (-) | True | LOC103045124 |
| TU20269 | other | upstream | 184272 | 32142728 ~ 32159878 (-) | False | nfkb1 |
| TU20525 | other | upstream | 855618 | 32814074 ~ 32820769 (-) | False | hopx |
| TU20526 | other | upstream | 855618 | 32814074 ~ 32819171 (-) | False | hopx |
| TU20527 | other | upstream | 855618 | 32814074 ~ 32819171 (-) | False | hopx |
| TU20934 | other | upstream | 2176136 | 34134592 ~ 34136732 (-) | True | G15497 |
