Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022672131.1 |
| length | 3219 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 11 |
| gene id | ifi35 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 3573242 ~ 3587765 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044248 | cellular catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0022624 | proteasome accessory complex | cellular_component |
| GO:0008537 | proteasome activator complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU10432 | lncRNA | upstream | 1003 | 3566669 ~ 3572239 (+) | True | G7651 |
| TU10412 | lncRNA | upstream | 5437 | 3526630 ~ 3567805 (+) | True | G7636 |
| TU10413 | lncRNA | upstream | 38149 | 3533371 ~ 3535093 (+) | True | G7637 |
| TU10367 | lncRNA | upstream | 75386 | 3494371 ~ 3497856 (+) | True | G7603 |
| TU10336 | lncRNA | upstream | 175952 | 3395595 ~ 3397290 (+) | True | G7587 |
| TU10437 | lncRNA | downstream | 24019 | 3611784 ~ 3612934 (+) | True | G7656 |
| TU10444 | lncRNA | downstream | 30296 | 3618061 ~ 3621228 (+) | True | G7661 |
| TU10446 | lncRNA | downstream | 39003 | 3626768 ~ 3627535 (+) | True | G7663 |
| TU10447 | lncRNA | downstream | 39883 | 3627648 ~ 3627874 (+) | True | G7664 |
| TU10448 | lncRNA | downstream | 40197 | 3627962 ~ 3628681 (+) | True | G7665 |
| XM_022672063.1 | mRNA | upstream | 149990 | 3299338 ~ 3423252 (+) | True | LOC103029856 |
| XM_015601611.2 | mRNA | upstream | 412549 | 3144487 ~ 3160693 (+) | True | LOC103027967 |
| XM_022672000.1 | mRNA | upstream | 437041 | 3106191 ~ 3136201 (+) | True | LOC107196972 |
| XM_022671994.1 | mRNA | upstream | 471245 | 3065275 ~ 3101997 (+) | True | LOC103026748 |
| XM_007234432.3 | mRNA | upstream | 597874 | 2974013 ~ 2975368 (+) | True | LOC103026461 |
| XM_022677820.1 | mRNA | downstream | 40922 | 3628687 ~ 3644274 (+) | True | LOC111194267 |
| XM_022672150.1 | mRNA | downstream | 54368 | 3642133 ~ 3656619 (+) | True | LOC103039250 |
| XM_022672153.1 | mRNA | downstream | 54368 | 3642133 ~ 3656619 (+) | False | LOC103039250 |
| XM_015602934.2 | mRNA | downstream | 152670 | 3740435 ~ 3779695 (+) | True | LOC103042028 |
| XM_007238985.3 | mRNA | downstream | 152670 | 3740435 ~ 3779695 (+) | False | LOC103042028 |
| TU10347 | other | upstream | 120576 | 3449221 ~ 3452666 (+) | True | G7593 |
| TU9947 | other | upstream | 1039479 | 2530616 ~ 2533763 (+) | False | G7296 |
| TU9779 | other | upstream | 1514419 | 2050319 ~ 2058823 (+) | False | carm1 |
| TU9686 | other | upstream | 2227811 | 1340206 ~ 1345431 (+) | True | G7109 |
| TU9540 | other | upstream | 2870922 | 700764 ~ 702320 (+) | True | G6995 |
| TU10606 | other | downstream | 336520 | 3924285 ~ 3929003 (+) | False | natd1 |
| TU10605 | other | downstream | 336623 | 3924388 ~ 3929003 (+) | False | natd1 |
| trnac-gca_1 | other | downstream | 558871 | 4146636 ~ 4146707 (+) | True | trnac-gca_1 |
| trnac-gca_2 | other | downstream | 560822 | 4148587 ~ 4148658 (+) | True | trnac-gca_2 |
| trnac-gca_3 | other | downstream | 563276 | 4151041 ~ 4151112 (+) | True | trnac-gca_3 |
