RNA id: trnag-acc


Basic Information

Item Value
RNA id trnag-acc
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnag-acc
representative True

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 8601267 ~ 8601338 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GCGTTGGTGGTGTAGTGGTGAGCATAGCTGCCTACCAAGCAGCTGACCTGGGTTCGAATCCCGGCCAACGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12330 lncRNA upstream 5404 8594824 ~ 8595863 (+) True G9073
TU12310 lncRNA upstream 8397 8503214 ~ 8592870 (+) True G9056
TU12314 lncRNA upstream 46546 8554254 ~ 8554721 (+) True G9059
TU12300 lncRNA upstream 115331 8478322 ~ 8485936 (+) False LOC103021541
TU12241 lncRNA upstream 160119 8438846 ~ 8441148 (+) False LOC103040872
TU12351 lncRNA downstream 104094 8705432 ~ 8762647 (+) True G9088
TU12360 lncRNA downstream 172166 8773504 ~ 8774905 (+) True G9096
TU12372 lncRNA downstream 197522 8798860 ~ 8801890 (+) True G9108
TU12383 lncRNA downstream 204189 8805527 ~ 8805727 (+) True G9111
TU12384 lncRNA downstream 205559 8806897 ~ 8807677 (+) True G9112
XM_022673163.1 mRNA upstream 119810 8464116 ~ 8481457 (+) True LOC103021541
XM_007232221.3 mRNA upstream 159438 8438786 ~ 8441829 (+) True LOC103040872
XM_007229946.3 mRNA upstream 498726 8077924 ~ 8102541 (+) True LOC103045652
XM_015605830.2 mRNA upstream 581233 7998653 ~ 8020034 (+) False gpatch8
XM_022673172.1 mRNA downstream 2867 8604205 ~ 8684262 (+) True helz
XM_022673244.1 mRNA downstream 239751 8841089 ~ 8885543 (+) False lmtk2
XM_022673237.1 mRNA downstream 239752 8841090 ~ 8885543 (+) True lmtk2
XM_022673268.1 mRNA downstream 318491 8919829 ~ 8928199 (+) False bri3
XM_022673312.1 mRNA downstream 898495 9499833 ~ 9611812 (+) True LOC103034760
TU12331 other upstream 4484 8595869 ~ 8596783 (+) True G9074
XR_002650961.1 other upstream 2321577 6278969 ~ 6279690 (+) True LOC111194160
TU11320 other upstream 2871767 5728922 ~ 5729500 (+) True G8287
TU11173 other upstream 3262219 5332065 ~ 5339048 (+) False hcrt
trnac-gca_4 other upstream 4449865 4151331 ~ 4151402 (+) True trnac-gca_4
TU12385 other downstream 208363 8809701 ~ 8810467 (+) True G9113
TU12401 other downstream 318505 8919843 ~ 8930980 (+) False bri3
TU12402 other downstream 318505 8919843 ~ 8930980 (+) True bri3
TU12403 other downstream 318505 8919843 ~ 8931005 (+) False bri3
TU12405 other downstream 318505 8919843 ~ 8930980 (+) False bri3