Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU280552 |
| length | 484 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC103046056 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035920.1 |
| NCBI id | CM008323.1 |
| chromosome length | 47266144 |
| location | 19957477 ~ 19968031 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU280559 | lncRNA | downstream | 6370 | 19925031 ~ 19951107 (-) | True | LOC103046671 |
| TU280546 | lncRNA | downstream | 105516 | 19814974 ~ 19851961 (-) | True | G206763 |
| TU280436 | lncRNA | downstream | 276267 | 19601599 ~ 19681210 (-) | True | G206685 |
| TU280403 | lncRNA | downstream | 390933 | 19566212 ~ 19566544 (-) | True | G206653 |
| TU280380 | lncRNA | downstream | 441358 | 19514117 ~ 19516119 (-) | True | G206634 |
| TU280571 | lncRNA | upstream | 106703 | 20074425 ~ 20074690 (-) | True | G206782 |
| TU280575 | lncRNA | upstream | 118455 | 20086177 ~ 20086493 (-) | True | G206784 |
| TU280586 | lncRNA | upstream | 139375 | 20107097 ~ 20193718 (-) | False | LOC103040644 |
| TU280583 | lncRNA | upstream | 222315 | 20190037 ~ 20193718 (-) | False | LOC103040644 |
| TU280584 | lncRNA | upstream | 222315 | 20190037 ~ 20274905 (-) | False | LOC103040644 |
| XM_007228409.3 | mRNA | downstream | 1898 | 19952166 ~ 19955579 (-) | True | LOC103046360 |
| XM_015601829.2 | mRNA | downstream | 6360 | 19942842 ~ 19951117 (-) | False | LOC103046671 |
| XM_007228413.3 | mRNA | downstream | 24491 | 19914549 ~ 19932986 (-) | False | LOC103047376 |
| XM_007228412.3 | mRNA | downstream | 24491 | 19914549 ~ 19932986 (-) | True | LOC103047376 |
| XM_015601839.2 | mRNA | downstream | 24507 | 19914549 ~ 19932970 (-) | False | LOC103047376 |
| XM_007228407.3 | mRNA | upstream | 1185 | 19968907 ~ 19977858 (-) | True | prps1 |
| XM_022683727.1 | mRNA | upstream | 1185 | 19968907 ~ 19976656 (-) | False | prps1 |
| XM_007228405.3 | mRNA | upstream | 109798 | 20077520 ~ 20084460 (-) | True | LOC103045046 |
| XM_007228404.3 | mRNA | upstream | 131777 | 20099499 ~ 20104840 (-) | True | vamp7 |
| XM_022683730.1 | mRNA | upstream | 155425 | 20123147 ~ 20134840 (-) | True | LOC103043510 |
| TU280287 | other | downstream | 1118561 | 18838369 ~ 18838916 (-) | True | G206575 |
| TU279905 | other | downstream | 1915564 | 18039706 ~ 18041913 (-) | False | LOC111195732 |
| TU279578 | other | downstream | 2656520 | 17271247 ~ 17300957 (-) | False | LOC103041988 |
| trnav-uac_4 | other | downstream | 3326426 | 16630979 ~ 16631051 (-) | True | trnav-uac_4 |
| trnav-aac_55 | other | downstream | 3327910 | 16629501 ~ 16629567 (-) | True | trnav-aac_55 |
| TU280694 | other | upstream | 495981 | 20463703 ~ 20512144 (-) | False | LOC103040850 |
| TU280695 | other | upstream | 495981 | 20463703 ~ 20512144 (-) | False | LOC103040850 |
| TU280696 | other | upstream | 495981 | 20463703 ~ 20512144 (-) | False | LOC103040850 |
| XR_002651782.1 | other | upstream | 2942322 | 22910044 ~ 22956024 (-) | False | LOC103035944 |
| XR_002651781.1 | other | upstream | 2942951 | 22910673 ~ 22956024 (-) | False | LOC103035944 |
