RNA id: TU282386



Basic Information


Item Value
RNA id TU282386
length 656
RNA type TUCP
GC content 0.50
exon number 2
gene id G208046
representative True

Chromosome Information


Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26212058 ~ 26212841 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TAtaagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGTGAGAATTTAGGGGTGTATAAGTGCGAGTGTTATTGAGTGCGAGTGTTATTGAGTGCGAGTGTTAGGAGTGCGAGTGTTAttggagtgcgagtgttatggagtgcgagtgttatggagtgtgaGCGTTATGGAGTGTGAGAATTTAGGGGTGAAtaagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGTGAGAATTTAGGGGTGTATAAGTGCGAGTGTTAtgagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagtgttatggagtgcgagcGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGCGTTATGGAGTGCGAGTATTTAAGGGTGTATAAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGACTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTGTGGAGTGCGAGTGTTgtggagtgcgagtgtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU282381 lncRNA downstream 42252 26163915 ~ 26169806 (-) True G208042
TU282369 lncRNA downstream 55012 26127107 ~ 26157046 (-) True G208030
TU282387 lncRNA upstream 2130 26214899 ~ 26215110 (-) True G208047
TU282388 lncRNA upstream 2684 26215453 ~ 26215729 (-) True G208048
TU282411 lncRNA upstream 67678 26280447 ~ 26281036 (-) True G208070
TU282696 lncRNA upstream 149317 26362086 ~ 26362363 (-) True G208307
TU282718 lncRNA upstream 204952 26417721 ~ 26418448 (-) True G208329
XM_022684342.1 mRNA downstream 106154 26103487 ~ 26105904 (-) False LOC111195835
XM_022684340.1 mRNA downstream 112231 26096805 ~ 26099827 (-) True LOC111195834
XM_022684393.1 mRNA downstream 116867 26092170 ~ 26095191 (-) True LOC111195867
XM_022683899.1 mRNA downstream 123643 26086651 ~ 26088415 (-) True LOC111195761
XM_022683900.1 mRNA downstream 126417 26083164 ~ 26085641 (-) False LOC111195762
XM_022684343.1 mRNA upstream 31479 26244248 ~ 26246421 (-) True LOC111195836
XM_022683916.1 mRNA upstream 401093 26613862 ~ 26640223 (-) True LOC103031232
XM_022684351.1 mRNA upstream 460837 26673606 ~ 26715253 (-) True cep290
XM_022683919.1 mRNA upstream 579993 26792762 ~ 26815459 (-) True kitlg
XM_022684352.1 mRNA upstream 733525 26946294 ~ 26949370 (-) True LOC111195856
TU282304 other downstream 219564 25989438 ~ 25992494 (-) True LOC111195825
TU282294 other downstream 274026 25919220 ~ 25938032 (-) True LOC111195756
TU282224 other downstream 503748 25648624 ~ 25708310 (-) False G207940
TU282801 other upstream 442674 26655443 ~ 26656184 (-) True G208394
XR_002651797.1 other upstream 933267 27146036 ~ 27152300 (-) True LOC111195771
TU283202 other upstream 2046535 28259304 ~ 28268342 (-) False wwp2
TU283796 other upstream 3811192 30023961 ~ 30024550 (-) True G209090
TU283834 other upstream 3949688 30162457 ~ 30162907 (-) False G209127

Expression Profile