RNA id: TU285129



Basic Information


Item Value
RNA id TU285129
length 470
lncRNA type sense_over
GC content 0.43
exon number 3
gene id c24h12orf73
representative False

Chromosome Information


Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 36809307 ~ 36810496 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TACAAATGGACTCGACCGTGACGGCGGCGTGCAGACCGGACAGACCAGAGACATTACAGATATTTAACGTTAGCTAAAGTGCTGATAAAAATATGACCATTTAGGTTCACACTCGAGTCATCAGACTTAATCTAGACAGATTAAGAGAGGGGCAAAAGTAACTGTCCATAATCACAAATCTGAGGATGCCAGCTGGAGTGTCTTGGCCAAGATACCTGAAAATGTTCGGTGCCAGCGTACTATCCATGTTTGCTGGCGCTGAGGTCGTACATCAGTATTACCGTCCAGATTTGacCATTCCAGACGTTCCACCTAAGCCTGGAGAACTGCGGACAGAGCTTCTTGGACTAAAGGCGAGACAGGCAGCGCCAGAAAAACATTAATGTCACGTTTTGTATTTAAGTGTACATACTGATGTAAACAACACATTTACTTTTGAGATCTTCTTTGTGTAATAAATTATATGCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU285135 lncRNA downstream 3859 36805131 ~ 36805452 (-) True G210110
TU285088 lncRNA downstream 38314 36769669 ~ 36770997 (-) True G210076
TU285085 lncRNA downstream 41760 36765414 ~ 36767551 (-) True G210074
TU285074 lncRNA downstream 75105 36733790 ~ 36734206 (-) True G210065
TU285004 lncRNA downstream 191503 36617584 ~ 36617808 (-) True G210014
TU285132 lncRNA upstream 5187 36815671 ~ 36822106 (-) True G210107
TU285146 lncRNA upstream 61095 36871579 ~ 36871944 (-) True G210120
TU285245 lncRNA upstream 297216 37107700 ~ 37108089 (-) True G210169
TU285249 lncRNA upstream 317210 37127694 ~ 37128205 (-) True G210173
TU285275 lncRNA upstream 354565 37165049 ~ 37167366 (-) False LOC103033395
XM_007252895.3 mRNA downstream 5009 36793382 ~ 36804302 (-) True LOC103044642
XM_022684365.1 mRNA downstream 16508 36790029 ~ 36792803 (-) True LOC107197706
XM_022684035.1 mRNA downstream 117987 36689599 ~ 36691324 (-) False LOC111195785
XM_022684034.1 mRNA downstream 117987 36689599 ~ 36691324 (-) True LOC111195785
XM_007245504.3 mRNA downstream 1573006 35172219 ~ 35236305 (-) False rnf130
XM_022684040.1 mRNA upstream 11799 36822283 ~ 36827999 (-) False LOC103023613
XM_022684039.1 mRNA upstream 11799 36822283 ~ 36827999 (-) True LOC103023613
XM_022684037.1 mRNA upstream 17407 36827891 ~ 36836649 (-) True LOC103023303
XM_022684046.1 mRNA upstream 141397 36951881 ~ 37003635 (-) False LOC103039285
XM_022684044.1 mRNA upstream 141397 36951881 ~ 37000317 (-) True LOC103039285
TU285068 other downstream 98568 36710420 ~ 36710743 (-) True G210059
TU284750 other downstream 2059105 34709771 ~ 34750206 (-) False LOC103045435
TU284739 other downstream 2172012 34629587 ~ 34637299 (-) False egf
TU284743 other downstream 2176993 34629587 ~ 34632318 (-) False egf
TU284540 other downstream 2534718 34234918 ~ 34274593 (-) True G209660
TU286079 other upstream 2717149 39527633 ~ 39540816 (-) True LOC103035726
TU286109 other upstream 2803234 39613718 ~ 39621500 (-) False bend4
XR_002651822.1 other upstream 2835870 39646354 ~ 39795941 (-) False atp8a1
TU286210 other upstream 3122654 39933138 ~ 39940047 (-) True LOC103023530
TU286446 other upstream 3550774 40361258 ~ 40363237 (-) True G210991

Expression Profile