RNA id: XM_007234335.3


Basic Information

Item Value
RNA id XM_007234335.3
length 4392
RNA type mRNA
GC content 0.47
exon number 23
gene id LOC103025209
representative True

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 39844601 ~ 39879453 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

CCTGTCAGCACACAAAGCTACATCAGTACCGATAGAGAGCAGAGCGGTTGTGCACGAGAGAGCGCGCGCGGATGGGGCAAGCTCCCTGATCGGACCCCCGGTGCCCAGTGCAGCTGCCTGCCCCCCACTGCGCGCTCTGAGCATGATGGGAAAGGGCTGCGCTGCTCCGCGTGCCGGACGCTCCGGTGTCTGGCCTCACCTCAGCTGTCTTATTCTGCTCGTGCAATGCACTGCCTTTAGCGCGAGCGCAGACTCGCTTTGGAGCCTCCTCAACACTGTAGAGAGCTATGAGCTCACTGTCCCCCAGTTCCTGAGCCCAGCAAGACACAAAAGATCCCAGATCAACACAAAGCATCCTTCAGAAGCAGAAGTCAAGATTACTGCAGAGGGAGTGGAGCTGGTTCTTCAACTACAGAGGAATGATGAGCTGTTGGCCCCCGACTTCCAAGAAATATGGTACAGTCCAAACGGAGCCCGCCAGTTCTCCATCCCATCCAACAGGGAGCACTGTTATTACCATGGTGAGGTTAAAGGGTTGGAGGACTCCAGTGTGGTTTTGAGCACATGCAATGGACTGAGGGGCATGATAAGCCTGAACCACAGTGTCACCTACATGATCGAGCCTCTAGCCAATCACACATCCTCGCAGAGCCACGCAGTGTTCCGCACTGAGAGAATGAAAATACAGACTGGCACCTGCAACCATCCCCACGCAGaccacaattacacacacagactggaGGAGCTGATTGGTGGGATTGCGCAGGCACACCAGGCCAAAAGGGAGAGGAGAGATGTAAGCCGCAGTATGAAGTATGTGGAGCTGATGCTGGTGGCCGATCACGCTGCGTTTGTGAAGCTTGGCCGCAGCCTGGAGAAGACCAAGGCCAAACTGCTTGAAGCAGCTAACTATGTGGACAAGtattacaagtcaCTGAATATCCGTGTAGCTCTGATCTGGCTGGAGATTTGGAATGACCAGAATAAGATCAGTGTGACGGACAACCCCTACAGCACACTCGGAGCCTTTCTAACCTGGAGGAGGAAACAGCTAAAACAGCTTCCCAATGACAACGCACAGCTCATCACGGGTATGTCATTCCAGGGCACCACTATTGGACTAGCCCCACTTAAAGCCATGTGTTCAGAATACCAGTCTGGAGGGGTAAACTCAGACCACTCTGAAAGTGCAGTTGGGATAGCAGCCACTATGGCCCATGAGATGGGGCATAACTTTGGGATGAGCCATGACAGTGAGGGCTGCTGCCAGGCCCTGCCAGAGGATGGGGGCTGCATTATGGCTGCAGCTACAGGGCACCCGTTCCCTCGTGTGTTTAACCCCTGTAACCAAGCCGAGCTGAAGCGTTATCTGAGCTCAGGAGGCGGAAAATGTCTGTTTAACCCCCCAAACACCAGGGCCATGTACGGGGGCCAGCGCTGTGGCAACGGCTACctggaggagggggaggagtgTGACTGTGGAGAGGCCGAGGAGTGTTCCAGTCCATGTTGTAATGCTAACAACTGCACACTAAAAGCAGGTGCTGAATGTGCTCATGGAGTATGCTGTGAAAACTGCAAGCTAAAAAGTCCCGGTCTGCTGTGCCGCCCTCCTTCAGGCTCCTGTGACCTGCCTGAATACTGCGATGGGAAATCCGAGTCCTGCCCTGCCAATTTCTACCTGGTGGACGGCAGCTCATGTGCACATGGCAAAGCCTACTGTTACACAGGCATGTGCCTGACCCTGGAGCAGCAGTGCCTCTCTCTGTGGGGAAAAGATGCCCGACCTGCTCCAGATCTGTGCTTCACTAAGGTGAACGAGGCTGGAGATTCTTTTGGAAACTGTGGCAAAGACCTGATGGGAAAATACAGAGCCTGCACTGAAAGGGATGCAAAATGTGGCAAGATTCAGTGTCTGAGtgctgcctctaaacccattgGAAGTAATGCTGTCCCGATCGACACCACTGTGCGTGATGGCCAGCGTAAGATCCTCTGCCGAGGTACACACGTCTACCGGCCTGACCAAGAAGAGGAGACCCAGGGAGACACACTAGACCTGGGGCTTGTCATGACCGGGACCAAGTGTGGGGACAATGCAGTTTGTTTCGGTGGAGAGTGTCGAAATGCATCCTTCCTGCAAGCGGATGAGTGCAATGCCAAGTGTCATAGTCATGGGCTCTGCAACAACAACCATAACTGCCACTGTGATGCAGGCTGGGCACCGCCATACTGTGAACAAGTAGGAAATGGTGGCAGTGTAGACAGTGGCCCAGTGATCACACACACCAACTTACTTCCAGTACTGGTGATCCTGCCTTTATTTCTTGTCCTGGGATTGGCTTTCCTGTTTCTTTGGTGGTGCTACAAGAAGAAGCTGCATTCTCTTAAAGAGACTGCTCACAGTCCTCCTCGGATATGCATTAATGTTCCTGGTTCACCAGAATCTAAAGCTCCTGCTAATGGTCACGCCAACCCAACATTCCAGCTAAAAAAGCCtgacacagagaaacagGCTAGCCAAAGGTCTAGTCCTTCTGGGCCACCAAGATCGAGACACTCCATTGTTCGGCCCACTGGGAAACCTCCACCAATCCCAGCATACGCATTACAACAGCAGAGTCCACTTTCAGAGACCACATCCAGTCCACATCCATCACCATCAGTCACACCCAAACCCAGACCAAACCCCCCCAGCAGACCTCCCCCACCCTGCCCTGTTACCAAACCCTCTCAGGTCAAAGAAGAGGTATTGCAAAGAAGAGGCCTCCAAGTGTCACCAGGGCTGTTACAGAAAGAGAAGTCCAATCTGATGCCCTCCGCTGGACATGTTAGGCATCAAACTGAAATCTGTGGGAAAAGCTGAGACATGGTGAAGCTTGTGAAGCCAATGGGCATTACTCCTCTGTGTAATTGTTTCTTTAAAAGACTGGAACAATGTCCAACATCCAGGCATTTACTCTACACTTCTTCAGGAATGGCCATGAAGACTTTTAAAGTTCAACACCACGTCTGCCTAATAGACTTCAAACCAGAAGTGTAACAAACTTGTTATATTTAACTTTCTTTTGGTGCTGTTCCAGTATTCATGTgccatatttttacatattgtttCATAACTATTTATTGCTAAGGCTTCAGGCTGAAGATGCAAAGGAATTGTTTCTCGATATTGCCTTCAATATGAGCATGAACGTATAGCGTACATCAAGAACTTGTCAGTGTGAGAGTGGATTGCACGCAGTAATGAAAAATGTGCTGCctcatgtaaaaaaaaggtttatgcATAActggaaaaacagagaaaattgATTAAGTGTTTGGTATATTAAGGAAACAATAAGAACTTGTGTAGAGCAATAACTACAGATTCATATTCAGTGATTACTTTGGTCTATCCTCTaattcttcattttattttattgcttgaTTTTATAATGAAGCAACTAGATTATGTGTATTTGGAAAGATGCTGCAGgttgtatataaatgtaatgcaaCAAACACTCATCGTCATCCTGTAACGCTCCAGGGAGATAAAcctggctttgctctctctttattcGCAAGCCACTCGGGGACACTTGACGAAATGCACCTTATATTGAGTATAATAAGGGCATCAAACCAGGGAATGCATATGTAAGATATATTGTATAGAcgctgttatgttttttttttggctctgaaatgtttgtttatgttttgtatTGAGAAATCAACAAATGAAGTTCTCTGAAAGTCCTGCTTATTGCAGTCACAATCTATACAGCCCTTTAAGATCCACTGGAGATctactgtaaatgtttaaatttatcAACACTGGGTAAATTCAGATTACAAAAGAGTTGTATggattatacagtatatctgaTAACAATCTACAGAAAACAAGTTTGTATtggatgacttttttttattatatttgctgGCTATCataataatatgaatatttCTAAATGCTCAATGTcttgttttgtatatatttagctCTCAATTGCCTTAAATGGTCCAGAGCAAAGCGGCTTTAAGCATTTTGCGTACAACGGTATGATGAGATTAAATGCTGTTGGTTCTGATGAGAGTCAACAACCAGGCATGTTATTGCCTTAAAATAGGGACCATATAAAATAAGGAAACACACTGTGAATCATGACTACATCTGTCCACCTAGTGCTGGACAAGTTCTAAGGTAGTCTACTGGGATCTTTATTATGTTGTCCTcagttattttgtttactttgcacCTTACTTGTAAGAAATGTACATGTTATTAAGggtaaaatgaaatgaaaatgtcttattttaaatGACTGGAACTGAAATTATTCAGCTGTTCTGAAATAATGTCTTGGATGGCAAAGCAGATCAAATAAAATTTGCCTAAAAGGG

Function

GO: NA

KEGG:

id description
K08608 ADAM19; disintegrin and metalloproteinase domain-containing protein 19

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU286125 lncRNA downstream 24698 39816624 ~ 39819903 (-) True G210800
TU286127 lncRNA downstream 24698 39816624 ~ 39819903 (-) False G210800
TU286132 lncRNA downstream 24698 39816624 ~ 39819903 (-) False G210800
TU286136 lncRNA downstream 24698 39816624 ~ 39819903 (-) False G210800
TU286124 lncRNA downstream 31037 39813339 ~ 39813564 (-) True G210799
TU286239 lncRNA upstream 156110 40035563 ~ 40036100 (-) True G210873
TU286234 lncRNA upstream 175270 40054723 ~ 40055218 (-) True G210868
TU286362 lncRNA upstream 192932 40072385 ~ 40074768 (-) True G210934
TU286374 lncRNA upstream 227151 40106604 ~ 40108923 (-) True G210937
TU286387 lncRNA upstream 258423 40137876 ~ 40138308 (-) True G210949
XM_022684090.1 mRNA downstream 2026 39836297 ~ 39842575 (-) True LOC103030807
XM_022684089.1 mRNA downstream 2966 39836297 ~ 39841635 (-) False LOC103030807
XM_022684091.1 mRNA downstream 2966 39837076 ~ 39841635 (-) False LOC103030807
XM_007234338.3 mRNA downstream 8830 39825313 ~ 39835771 (-) False slc30a9
XM_007234337.3 mRNA downstream 8831 39825313 ~ 39835770 (-) True slc30a9
XM_007234334.3 mRNA upstream 3231 39882684 ~ 39886837 (-) True LOC103024693
XM_007234332.3 mRNA upstream 10044 39889497 ~ 39907791 (-) True LOC103024376
XM_022684123.1 mRNA upstream 31991 39911444 ~ 39921834 (-) True mlkl
XM_022684135.1 mRNA upstream 43745 39923198 ~ 39926645 (-) True LOC111195796
XM_007234331.3 mRNA upstream 49111 39928564 ~ 39931679 (-) True LOC103024064
XR_002651822.1 other downstream 48660 39646354 ~ 39795941 (-) False atp8a1
TU286109 other downstream 223101 39613718 ~ 39621500 (-) False bend4
TU286079 other downstream 303785 39527633 ~ 39540816 (-) True LOC103035726
TU285068 other downstream 3133858 36710420 ~ 36710743 (-) True G210059
TU284750 other downstream 5094395 34709771 ~ 34750206 (-) False LOC103045435
TU286210 other upstream 53685 39933138 ~ 39940047 (-) True LOC103023530
TU286446 other upstream 481805 40361258 ~ 40363237 (-) True G210991
TU286454 other upstream 493352 40372805 ~ 40378353 (-) True G210995
TU286524 other upstream 683410 40562863 ~ 40563828 (-) False LOC103026726
TU286910 other upstream 1427493 41306946 ~ 41310735 (-) True LOC103037199

Expression Profile