RNA id: XM_007237101.3


Basic Information

Item Value
RNA id XM_007237101.3
length 1439
RNA type mRNA
GC content 0.48
exon number 9
gene id c24h11orf49
representative True

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 25143991 ~ 25150989 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCCTGCCGGAATACAGGTGGGAAGAAGCTGCACGCTGCAGTATGGCTGTATCCAGGAGACGATGAAAATGAACACAGAGCGGTTTACCCTCACAACAGACGACTATTTAGCCGAGACTAATGCCCTGTTCTATCTGAGTGATGCGGTCACGCAGCTGCTGGAGCACAGAGAGGAGTACATTCAGTTCGGCATCGTGCGCTATTTTGCAGAATAttttacaagTGTGAAGAATGGAAATCATGTCCTCTTCAGAGAATTCAACTACATTAAAGCCACACCACACAACAGAGCCTCCTTCATCCACATCTTCTGGAAGTGCTTCAGACAAATTGGGAAAAAtggagATTTGTTGACGGTGTTGGAATACAGTTCACTCCTTCAGCTGCTGTGTCCAGACTTTCCCACTGAAATGGTGCAGAACACAGCCCGGATTGTATTAATGGACGATGCTATGGACTGCCTAATGTCCCTCGCAGATTTCATCTACTCTTTTCAGTTACAGTTCTACTATGAAGAGTTCCTGGAGAGTGTGTTGGTGATTTATGAGGACTTGCTCGAGGGGAAGAACCCAAACACTGTCATCGTCCCCACCTCCTCATCGGCAGAGCCGTTATCCAGCACGGTCAGTGAGGAGACGGACACACAGGAGGGGGTGGACTCATCCGTCTTCCTGGAGTGCATCAACGGTCTGTGCGAGCGCTTCAAACACAAacatCCGTCTGTCTCCTGCATTAAAGAGATTCTCGAGAGCAACCTCAGAGTGTCCTACTACAGCTTCCTGATGGCCTTGGCCAAACACGAGGGAATCAGCCAGGACATCGGAGCTCTTCCAAACAGATCCGATCTGCTCATTGACCCAGAGATGGATCAGGAACTGGAGAGGCTTGTAGCTCAGGTGGCCATCAGTCCCACGTCCAACAGTAGCAGCAGTGCAGCTGGACTGAAGGAGCCGCCCAGGAAAGCCTCACCCCGCAAATCCCTCCACCAGAGGCGCAGGATCGAGATGGAGAGTGATGGATCTACTGAGGAGACCGACTCCTCTGAGAATTAAAACTCAGAGACTCTGCACCCCACCCCACTGTGCCACAATCTCACTGTGTCTATCACACAGTACTAAACTCATCTAGACTCCCATCACAGTATTATAGCAATACCAACAGTTATgtatgtcattcattcatatgcTGCCCATCAAATGTTTGGGAACACATTTTACAACCATTGCACTGCATTACATTGAGCTCTGCATTTAATCCATCATCACTACCAGTCCATGGGAACAAAACACCAACCTTCTTCTTCCAAACTGGCTTCTCGAGTCTTAAAACCATGGCTCCTTTTAACACATATCCCTTGTTTTTCagtgtaacccttccctttAGAACAGAGTTACAAAGGAAAAAGGGTGAAATCTTCCCCTtaagaattgaaaaaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU281993 lncRNA downstream 98374 24962572 ~ 25045617 (-) True G207781
TU281991 lncRNA downstream 98374 25031099 ~ 25045617 (-) False G207781
TU281975 lncRNA downstream 197463 24897302 ~ 24946528 (-) True G207768
TU281974 lncRNA downstream 197463 24945964 ~ 24946528 (-) False G207768
TU281973 lncRNA downstream 251728 24891733 ~ 24892263 (-) True G207767
TU282138 lncRNA upstream 2639 25153628 ~ 25166678 (-) True G207881
TU282131 lncRNA upstream 40248 25191237 ~ 25193673 (-) True G207874
TU282150 lncRNA upstream 107851 25258840 ~ 25259834 (-) False usb1
TU282155 lncRNA upstream 128376 25279365 ~ 25299692 (-) True G207886
TU282178 lncRNA upstream 166013 25317002 ~ 25352674 (-) False G207903
XM_022683862.1 mRNA downstream 233218 24904570 ~ 24910773 (-) False LOC103042358
XM_022683861.1 mRNA downstream 233218 24904570 ~ 24910773 (-) True LOC103042358
XM_022683859.1 mRNA downstream 313028 24813330 ~ 24830963 (-) True LOC103044011
XM_022683858.1 mRNA downstream 355968 24779413 ~ 24788023 (-) True LOC111195752
XM_022683856.1 mRNA downstream 369840 24757394 ~ 24774151 (-) False LOC103042272
XM_022683871.1 mRNA upstream 61576 25212565 ~ 25231011 (-) True drc7
XM_022683873.1 mRNA upstream 100246 25251235 ~ 25260167 (-) True usb1
XM_022683874.1 mRNA upstream 100943 25251932 ~ 25260167 (-) False usb1
XM_022683875.1 mRNA upstream 103435 25254424 ~ 25260167 (-) False usb1
XM_015602397.2 mRNA upstream 119152 25270141 ~ 25277760 (-) True ccdc113
TU281979 other downstream 195140 24948131 ~ 24948851 (-) True G207772
TU281888 other downstream 614924 24524734 ~ 24529067 (-) True G207707
XR_452612.3 other downstream 1123677 23938925 ~ 24020314 (-) False dnajc24
TU282177 other upstream 166013 25317002 ~ 25321625 (-) True G207903
TU282224 other upstream 497635 25648624 ~ 25708310 (-) False G207940
TU282223 other upstream 504988 25655977 ~ 25708310 (-) False G207940
TU282220 other upstream 552477 25703466 ~ 25708310 (-) False G207940
TU282294 other upstream 768231 25919220 ~ 25938032 (-) True LOC111195756

Expression Profile