Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007245508.3 |
| length | 1362 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | aga |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035920.1 |
| NCBI id | CM008323.1 |
| chromosome length | 47266144 |
| location | 34774062 ~ 34785667 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0003948 | N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity | molecular_function |
| id | description |
|---|---|
| K01444 | AGA, aspG; N4-(beta-N-acetylglucosaminyl)-L-asparaginase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU284746 | lncRNA | downstream | 140846 | 34632785 ~ 34633216 (-) | True | G209814 |
| TU284744 | lncRNA | downstream | 143728 | 34629587 ~ 34630334 (-) | False | egf |
| TU284716 | lncRNA | downstream | 160666 | 34610036 ~ 34613396 (-) | True | G209793 |
| TU284721 | lncRNA | downstream | 207544 | 34563439 ~ 34566518 (-) | True | G209798 |
| TU284562 | lncRNA | downstream | 387427 | 34386145 ~ 34386635 (-) | True | G209682 |
| TU284808 | lncRNA | upstream | 339496 | 35125163 ~ 35145580 (-) | True | LOC111195784 |
| XR_002651809.1 | lncRNA | upstream | 350551 | 35136218 ~ 35142312 (-) | False | LOC111195784 |
| TU284805 | lncRNA | upstream | 350587 | 35136254 ~ 35138086 (-) | False | LOC111195784 |
| TU284811 | lncRNA | upstream | 353783 | 35139450 ~ 35140107 (-) | True | G209872 |
| TU284846 | lncRNA | upstream | 522652 | 35308319 ~ 35308594 (-) | True | G209894 |
| XM_022684016.1 | mRNA | downstream | 14971 | 34741691 ~ 34759091 (-) | True | LOC103045435 |
| XM_022684015.1 | mRNA | downstream | 42226 | 34727162 ~ 34731836 (-) | True | spata4 |
| XM_007245511.3 | mRNA | downstream | 66006 | 34676126 ~ 34708056 (-) | True | gpm6a |
| XM_007245512.3 | mRNA | downstream | 99855 | 34659490 ~ 34674207 (-) | True | LOC103036564 |
| XM_022684364.1 | mRNA | downstream | 117578 | 34620461 ~ 34656484 (-) | True | egf |
| XM_022684023.1 | mRNA | upstream | 361964 | 35147631 ~ 35167225 (-) | False | ctso |
| XM_022684022.1 | mRNA | upstream | 361964 | 35147631 ~ 35167215 (-) | False | ctso |
| XM_022684024.1 | mRNA | upstream | 367238 | 35152905 ~ 35167209 (-) | True | ctso |
| XM_007245505.3 | mRNA | upstream | 382873 | 35168540 ~ 35236306 (-) | True | rnf130 |
| XM_022684026.1 | mRNA | upstream | 386552 | 35172219 ~ 35263408 (-) | False | rnf130 |
| TU284750 | other | downstream | 23856 | 34709771 ~ 34750206 (-) | False | LOC103045435 |
| TU284739 | other | downstream | 136763 | 34629587 ~ 34637299 (-) | False | egf |
| TU284743 | other | downstream | 141744 | 34629587 ~ 34632318 (-) | False | egf |
| TU284540 | other | downstream | 499469 | 34234918 ~ 34274593 (-) | True | G209660 |
| TU284514 | other | downstream | 561213 | 34170767 ~ 34212849 (-) | True | G209640 |
| TU285068 | other | upstream | 1924753 | 36710420 ~ 36710743 (-) | True | G210059 |
| TU286079 | other | upstream | 4741966 | 39527633 ~ 39540816 (-) | True | LOC103035726 |
| TU286109 | other | upstream | 4828051 | 39613718 ~ 39621500 (-) | False | bend4 |
| XR_002651822.1 | other | upstream | 4860687 | 39646354 ~ 39795941 (-) | False | atp8a1 |
| TU286210 | other | upstream | 5147471 | 39933138 ~ 39940047 (-) | True | LOC103023530 |
