Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022683856.1 |
| length | 1232 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 9 |
| gene id | LOC103042272 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035920.1 |
| NCBI id | CM008323.1 |
| chromosome length | 47266144 |
| location | 24757231 ~ 24774151 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0045471 | response to ethanol | biological_process |
| GO:0055003 | cardiac myofibril assembly | biological_process |
| GO:0055008 | cardiac muscle tissue morphogenesis | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0042493 | response to drug | biological_process |
| GO:0030240 | skeletal muscle thin filament assembly | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0030049 | muscle filament sliding | biological_process |
| GO:0060048 | cardiac muscle contraction | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0070062 | extracellular exosome | cellular_component |
| GO:0031674 | I band | cellular_component |
| GO:0042643 | obsolete actomyosin, actin portion | cellular_component |
| GO:0017022 | myosin binding | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU281887 | lncRNA | downstream | 179788 | 24530725 ~ 24577606 (-) | True | G207706 |
| TU281885 | lncRNA | downstream | 236645 | 24517463 ~ 24520749 (-) | True | G207705 |
| TU281881 | lncRNA | downstream | 249451 | 24506149 ~ 24507943 (-) | True | G207702 |
| TU281861 | lncRNA | downstream | 260730 | 24443276 ~ 24496664 (-) | True | G207692 |
| TU281968 | lncRNA | upstream | 38503 | 24812654 ~ 24812952 (-) | True | G207763 |
| TU281973 | lncRNA | upstream | 117582 | 24891733 ~ 24892263 (-) | True | G207767 |
| TU281975 | lncRNA | upstream | 123151 | 24897302 ~ 24946528 (-) | True | G207768 |
| TU281974 | lncRNA | upstream | 171813 | 24945964 ~ 24946528 (-) | False | G207768 |
| TU281993 | lncRNA | upstream | 188421 | 24962572 ~ 25045617 (-) | True | G207781 |
| XM_022683850.1 | mRNA | downstream | 10398 | 24532648 ~ 24746996 (-) | False | LOC103031505 |
| XM_022683851.1 | mRNA | downstream | 10398 | 24532648 ~ 24746996 (-) | True | LOC103031505 |
| XM_022683852.1 | mRNA | downstream | 10398 | 24532648 ~ 24746996 (-) | False | LOC103031505 |
| XM_022683849.1 | mRNA | downstream | 10398 | 24532648 ~ 24746996 (-) | False | LOC103031505 |
| XM_022683854.1 | mRNA | downstream | 10399 | 24532648 ~ 24746995 (-) | False | LOC103031505 |
| XM_022683858.1 | mRNA | upstream | 5262 | 24779413 ~ 24788023 (-) | True | LOC111195752 |
| XM_022683859.1 | mRNA | upstream | 39179 | 24813330 ~ 24830963 (-) | True | LOC103044011 |
| XM_022683862.1 | mRNA | upstream | 130419 | 24904570 ~ 24910773 (-) | False | LOC103042358 |
| XM_022683861.1 | mRNA | upstream | 130419 | 24904570 ~ 24910773 (-) | True | LOC103042358 |
| XM_007237101.3 | mRNA | upstream | 369840 | 25143991 ~ 25150989 (-) | True | c24h11orf49 |
| TU281888 | other | downstream | 228327 | 24524734 ~ 24529067 (-) | True | G207707 |
| XR_452612.3 | other | downstream | 737080 | 23938925 ~ 24020314 (-) | False | dnajc24 |
| TU281979 | other | upstream | 173980 | 24948131 ~ 24948851 (-) | True | G207772 |
| TU282177 | other | upstream | 542851 | 25317002 ~ 25321625 (-) | True | G207903 |
| TU282224 | other | upstream | 874473 | 25648624 ~ 25708310 (-) | False | G207940 |
| TU282223 | other | upstream | 881826 | 25655977 ~ 25708310 (-) | False | G207940 |
| TU282220 | other | upstream | 929315 | 25703466 ~ 25708310 (-) | False | G207940 |
