RNA id: XM_022684049.1


Basic Information

Item Value
RNA id XM_022684049.1
length 3406
RNA type mRNA
GC content 0.42
exon number 6
gene id LOC103033714
representative True

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 37206239 ~ 37218291 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ACCCCACCCAAGCTAAACAAACTGCGTTTTTGAATGGACAAACATGACACTTGATCTTGGGATCATCAGTCAGTCTGACTAAATGAGCTCATGTGGACTGTCCCACCTGAAAAACGGCGTGTGGGTAACGTGATGCCGTGGCTTTAAAACGCAGAGCCCACAGCGCCCTGACGGCGGATGCTACAGCACACCTGCTCCATGTTTGCCTTCACCTGCCTTCTGAGTGGCTAGCGGGAACTTTAGGCTGTTCTGAGCAGCCTGCTAAAACCAGCCCGCCTGCTCCTGAAACAACACGGTCACTTcgaaacacaaacacaggcaCGGGCTGTGAAAACGGGCTGTGAGTAGAAGCAGCGTGAGAGAGGACGCGttcaggagagagaggagaggctttctgctgctgctgttaccggGTTTCTCGCGGTAACGTTACTCTGACAGCAGCATGCCGGTCCAAATTCCGGACGACACCGACTTCGCCTCTTTCAAGGACCAGTGCGAGAACCACGACGGATGGTTAGCGCGCTACAACAAAGGAGGAGTGACGGTGTGGTGTCGAGAAGAGGAGACCAAAACAGTGCAGAAGCTGAAGATGAGAATTGTGTGCAAGGACGTTCGAGCCGAAACGCTGTATGATGTCTTGCACGACACAAGTTACCGGAAGAAGTGGGACACTAATATGATTGACACGTTTGATATTGGCAGGCTGACGGTCAATGCTGATGTTGGCTATTACTCCTggAAATGTCCGAGTCCACTGAAAAACAGAGACTTCGTCACCATGCGCTCCTGGCTTCCCCTTGGCAACGACTACTTGATAATCAACTACTCGGTCAAACACCCGCAATACCCACCAAAGAAAGACTATGTCAGAGCTGTGTCTTTACTCACTGGGTACTTAATCCAGTCCAATGGACCAAACTGCTGCACTCTTTACTACTTAACACAAGTAGATCCGAGAGgttCTTTACCCAAATGGGTCGTGAATAGGGTCTCACAGTTTGTGGCACCAAAgGCCATGAGGAAGATCTACAAAGCTTGTCTAAAGTATCCAGAGTGGAAGCGGAAACACGAGCCTAACCTGAAGCCGTGGATGTACCCGGAGCAAAACACGCTCCCCTGCATCAATGTGGCCGATCTCACTGTGCAGAGAGCCGACTCGCTGGAGAACATTGATGAGAGTGGCCTGAGCGAAGAGAAGAACCAACACAACAGTGATGACGAGGAGACCTAAACCCGCAGACTCTGTACATTTACCTGAGCGAGTCTGAGTGTGTATGTTTGAATGTGATTGCGGACCGATTATACACAGGTACTTCTGCAGAATTTTACTGTCACTCATTTTCAGTTGCACTTTAGGCATTCTTTGCATTTGCATTCCTGATGACCATATCAATGTAACGTTTCAGAGTTGCTGTATATTTTTGACGTTAATGATTGTGAGCAATTGCACGCTATAGCCTGATTTCGCAGAATGCTGGACTTTTGACATCATATTGCACATGTCACAACTGAGTTTGATTTGTGAGATCAACATTAACAATCTTATTCATTTAGACATGAACACTTCAGCTCACAGGTGTTCATTCTTATCCTGTGTGGGGGGCAGATTTTTCAATTCCAGCTAGAGCTGGACGATATGGGTAAATTTATATCACAACATACTCACAATATACTTCATTTTGATCAATGCAATACATTTCTGATAtagatataaacagtataaaagtcaACACCTGTAATGTTCGTAATCATAATGACAGAGCtgggtaaaatggtaaaatatgaGAGTTTCATGATACacaatttatcacaatattttggcATGCAGACAAAATTCATTAGGACTgaaaaaatgctatttaaatACTCTCTAATGCAAAGTATAGTGATTTAATGCAGTATGTAGTAATGCAGTAGTGAAAATGCAtcaacatacaataaaatattgacaaATTGCCCATCTCAAATAATTAGTCAGATCAGCTTAAGCTGGTATGGAATGGAACTTTGCACCACCCCATCCTACCCTTTATGTATGTGGTTGGACACCCATGCTTTTAGTATATTAAGTCTTTGGGTTACCTATATGTAAATCCTCTCATTTAGCTCAGGctggcaaaaaaatacaaaatttccTTATTACCTTGAATGTAGTCGATTAGCCAAAAACTTATGAGTATGATTTATCCATATCCGTTCCTTGTAagctacattagctttgtaGTTTACGTGCAACAGAAGAAGAAACCAGACATACCTTGGCTGATCAACTACATTCAAGGTAAGGAGAAAATAGTGTATTTCTTTTTTGCTGAACTGATCTGTCATGTCAGTCACTGCAACTTTTCCACTTTGTTTCTTGGCTCGTGCATCCAGTGATCTCCATTCTTTATTCTGTCATCATGCAACTTGATCGCTGTCTTAATCAGGTGTCATTTTTCCTGTGTACAACCTGCCAGGATGACCAGCAGTTTCATTTCTACAGTAGTCCAACAGTGGGAACTGAGAGTTATACAGAACTCTGTGGCTGCCTGCAGGGATTTCCACCTCATTAGCTCAATCGTTACATCTGACTCATTGCTTACCAACAAGACCTCAGGagttgtacaaaaaaaacttaaaaaaacagtgcTTTTCACTGTTCTCTAATTTACAGTATGTGTGCTTTTGGCTTTCTGAGCCTGGATCACTTTGTGCTGTAATTTTCCCATTGTCACATTTAAGAATAAAGTTTTATCTTGTAAGTTTTGCGAATGATTTTGTGCATGGATGTTTTGATTGAATGACACTGTAACACAAGGATGGGGCATGGGGCATTTCTATACAAAAAATGCATCACTTTAATGCATTTCTTTTGCACGGGACTGTTCTTTGCATGTAGCACCTTCAGCTTTGTTAAAGCTAATGTACTGATTTGGCCCGGAACTGGATTCACAAAAAGCTTTCAAGAGGAAAACGAAAACCTTGCTGTGTTTCAAAGCATAAGCTACAGCCAGAGTAAGACAGGTCCTTGATAGGACTGTCTTACCGAGACTCCTTCTTAGTAGCCTAATATACATGGCAAAGTCATCTACATGGGCTGcattattatataatgtattatatacattacattgattggtttgcagAATGTTTGTCAAGTCACTTTCCCAGGTGTTGTACCAAATCCTGTAAACTCCTTTTGCATAAATGTGTGTCACGTAGGTGAAGCAGTGTTGCAGTGTAGCAGTGTTACAGATTCCAGTGGGATTacctttatttttgtgtataaataaggatttatctactgttacagtagatacagaaattaccagtgtaatctgttgtacccattcTGCTGTGAGATCCACCTACATAAAAAGGGGTTATTGGATTTCGGtccttttctccttctcttgTTGAA

Function

GO: NA

KEGG:

id description
K24142 STARD10; StAR-related lipid transfer protein 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU285275 lncRNA downstream 38873 37165049 ~ 37167366 (-) False LOC103033395
TU285249 lncRNA downstream 78034 37127694 ~ 37128205 (-) True G210173
TU285245 lncRNA downstream 98150 37107700 ~ 37108089 (-) True G210169
TU285146 lncRNA downstream 334295 36871579 ~ 36871944 (-) True G210120
TU285132 lncRNA downstream 384133 36815671 ~ 36822106 (-) True G210107
TU285279 lncRNA upstream 9970 37228261 ~ 37228612 (-) True G210197
TU285314 lncRNA upstream 80823 37299114 ~ 37301802 (-) True G210223
TU285331 lncRNA upstream 91087 37309378 ~ 37314616 (-) True G210235
TU285339 lncRNA upstream 105116 37323407 ~ 37323626 (-) True G210242
TU285416 lncRNA upstream 367295 37585586 ~ 37586656 (-) True G210306
XM_007246456.3 mRNA downstream 1854 37165034 ~ 37204385 (-) True LOC103033395
XM_022684047.1 mRNA downstream 99782 37100295 ~ 37106457 (-) False LOC111195788
XM_022684048.1 mRNA downstream 101179 37100295 ~ 37105060 (-) True LOC111195788
XM_007246459.3 mRNA downstream 119260 37083976 ~ 37086979 (-) True polr2g
XM_015605100.2 mRNA downstream 124033 37072586 ~ 37082206 (-) True eef1g
XM_022684050.1 mRNA upstream 62550 37280841 ~ 37285730 (-) True LOC103038966
XM_007246443.3 mRNA upstream 173779 37392070 ~ 37407429 (-) True ccdc69
XM_007246442.3 mRNA upstream 196301 37414592 ~ 37421150 (-) True gm2a
XM_007246438.3 mRNA upstream 340403 37558694 ~ 37625939 (-) True LOC103027906
XM_007246434.3 mRNA upstream 475762 37694053 ~ 37776716 (-) False glra1
TU285068 other downstream 495496 36710420 ~ 36710743 (-) True G210059
TU284750 other downstream 2456033 34709771 ~ 34750206 (-) False LOC103045435
TU284739 other downstream 2568940 34629587 ~ 34637299 (-) False egf
TU284743 other downstream 2573921 34629587 ~ 34632318 (-) False egf
TU284540 other downstream 2931646 34234918 ~ 34274593 (-) True G209660
TU286079 other upstream 2309342 39527633 ~ 39540816 (-) True LOC103035726
TU286109 other upstream 2395427 39613718 ~ 39621500 (-) False bend4
XR_002651822.1 other upstream 2428063 39646354 ~ 39795941 (-) False atp8a1
TU286210 other upstream 2714847 39933138 ~ 39940047 (-) True LOC103023530
TU286446 other upstream 3142967 40361258 ~ 40363237 (-) True G210991

Expression Profile