Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45036 |
| length | 627 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G33454 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 988920 ~ 991094 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU44981 | lncRNA | upstream | 44451 | 858648 ~ 944469 (+) | True | G33413 |
| TU44996 | lncRNA | upstream | 67362 | 912388 ~ 921558 (+) | True | G33426 |
| TU44861 | lncRNA | upstream | 376809 | 608543 ~ 612111 (+) | False | G33329 |
| TU44855 | lncRNA | upstream | 376958 | 606044 ~ 611962 (+) | False | G33329 |
| TU44853 | lncRNA | upstream | 378096 | 606044 ~ 610824 (+) | True | G33329 |
| TU45046 | lncRNA | downstream | 2641 | 992317 ~ 992518 (+) | True | trnal-aag |
| TU45056 | lncRNA | downstream | 49366 | 1039042 ~ 1046002 (+) | False | LOC111192341 |
| XR_002649835.1 | lncRNA | downstream | 52900 | 1042576 ~ 1046503 (+) | True | LOC111192341 |
| TU45100 | lncRNA | downstream | 195389 | 1185065 ~ 1221130 (+) | True | LOC111192399 |
| XR_002649899.1 | lncRNA | downstream | 195406 | 1185082 ~ 1220976 (+) | False | LOC111192399 |
| XM_007234085.3 | mRNA | upstream | 3539 | 983167 ~ 985381 (+) | True | LOC103023950 |
| XM_007234094.3 | mRNA | upstream | 15438 | 970636 ~ 973482 (+) | True | LOC103026642 |
| XM_007234080.3 | mRNA | upstream | 138658 | 838305 ~ 850262 (+) | True | LOC103022594 |
| XM_007234073.2 | mRNA | upstream | 233924 | 752588 ~ 754996 (+) | True | LOC103047415 |
| XM_007234074.3 | mRNA | upstream | 243777 | 735828 ~ 745143 (+) | False | acbd4 |
| XM_007257192.3 | mRNA | downstream | 124912 | 1114588 ~ 1120630 (+) | True | LOC103037439 |
| XM_015607862.2 | mRNA | downstream | 140279 | 1129955 ~ 1138168 (+) | True | wdr45b |
| XM_007257194.3 | mRNA | downstream | 140288 | 1129964 ~ 1138168 (+) | False | wdr45b |
| XM_007257196.3 | mRNA | downstream | 148763 | 1138439 ~ 1156171 (+) | True | foxk2 |
| XM_007257195.3 | mRNA | downstream | 148816 | 1138492 ~ 1156171 (+) | False | foxk2 |
| TU45029 | other | upstream | 3548 | 983191 ~ 985372 (+) | False | LOC103023950 |
| trnac-gca_9 | other | upstream | 107482 | 881367 ~ 881438 (+) | True | trnac-gca_9 |
| TU44688 | other | upstream | 564516 | 419010 ~ 424404 (+) | False | LOC111192417 |
| TU44555 | other | upstream | 843558 | 128385 ~ 145362 (+) | False | LOC103039306 |
| trnal-aag | other | downstream | 2636 | 992312 ~ 992393 (+) | False | trnal-aag |
| trnar-ucg | other | downstream | 131720 | 1121396 ~ 1121468 (+) | True | trnar-ucg |
| trnam-cau_18 | other | downstream | 132125 | 1121801 ~ 1121872 (+) | True | trnam-cau_18 |
| TU45181 | other | downstream | 379526 | 1369202 ~ 1388019 (+) | True | LOC111192342 |
| trnaq-cug_1 | other | downstream | 847829 | 1837505 ~ 1837576 (+) | True | trnaq-cug_1 |
