RNA id: trnal-aag


Basic Information

Item Value
RNA id trnal-aag
length 82
RNA type tRNA
GC content 0.65
exon number 1
gene id trnal-aag
representative False

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 992312 ~ 992518 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGTAGCgtggccgagcggtctaaggcgctggaTTAAGGCTCCAGTCTCTTCGGGggcgtgggttcgaatcccaccGCTGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45037 lncRNA upstream 1218 988920 ~ 991094 (+) False G33454
TU45036 lncRNA upstream 2636 988920 ~ 989676 (+) True G33454
TU44981 lncRNA upstream 47843 858648 ~ 944469 (+) True G33413
TU44996 lncRNA upstream 70754 912388 ~ 921558 (+) True G33426
TU44861 lncRNA upstream 380201 608543 ~ 612111 (+) False G33329
TU45056 lncRNA downstream 46649 1039042 ~ 1046002 (+) False LOC111192341
XR_002649835.1 lncRNA downstream 50183 1042576 ~ 1046503 (+) True LOC111192341
TU45100 lncRNA downstream 192672 1185065 ~ 1221130 (+) True LOC111192399
XR_002649899.1 lncRNA downstream 192689 1185082 ~ 1220976 (+) False LOC111192399
TU45114 lncRNA downstream 351017 1343410 ~ 1344921 (+) True G33511
XM_007234085.3 mRNA upstream 6931 983167 ~ 985381 (+) True LOC103023950
XM_007234094.3 mRNA upstream 18830 970636 ~ 973482 (+) True LOC103026642
XM_007234080.3 mRNA upstream 142050 838305 ~ 850262 (+) True LOC103022594
XM_007234073.2 mRNA upstream 237316 752588 ~ 754996 (+) True LOC103047415
XM_007234075.3 mRNA upstream 247169 735860 ~ 745143 (+) True acbd4
XM_007257192.3 mRNA downstream 122195 1114588 ~ 1120630 (+) True LOC103037439
XM_015607862.2 mRNA downstream 137562 1129955 ~ 1138168 (+) True wdr45b
XM_007257194.3 mRNA downstream 137571 1129964 ~ 1138168 (+) False wdr45b
XM_007257196.3 mRNA downstream 146046 1138439 ~ 1156171 (+) True foxk2
XM_007257195.3 mRNA downstream 146099 1138492 ~ 1156171 (+) False foxk2
TU45029 other upstream 6940 983191 ~ 985372 (+) False LOC103023950
trnac-gca_9 other upstream 110874 881367 ~ 881438 (+) True trnac-gca_9
TU44688 other upstream 567908 419010 ~ 424404 (+) False LOC111192417
TU44555 other upstream 846950 128385 ~ 145362 (+) False LOC103039306
trnar-ucg other downstream 129003 1121396 ~ 1121468 (+) True trnar-ucg
trnam-cau_18 other downstream 129408 1121801 ~ 1121872 (+) True trnam-cau_18
TU45181 other downstream 376809 1369202 ~ 1388019 (+) True LOC111192342
trnaq-cug_1 other downstream 845112 1837505 ~ 1837576 (+) True trnaq-cug_1
TU45414 other downstream 1058405 2050798 ~ 2056874 (+) True amz2