Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45353 |
| length | 553 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | G33693 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 1862786 ~ 1863512 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45350 | lncRNA | downstream | 5071 | 1856968 ~ 1857715 (-) | True | G33690 |
| XR_002649840.1 | lncRNA | downstream | 135529 | 1720811 ~ 1727257 (-) | True | LOC111192345 |
| XR_002649839.1 | lncRNA | downstream | 142340 | 1718648 ~ 1720446 (-) | True | LOC111192344 |
| TU45161 | lncRNA | downstream | 688131 | 1174440 ~ 1174655 (-) | True | G33545 |
| TU45154 | lncRNA | downstream | 706609 | 1153432 ~ 1156177 (-) | True | G33539 |
| TU45402 | lncRNA | upstream | 112317 | 1975829 ~ 1976108 (-) | True | G33731 |
| TU45403 | lncRNA | upstream | 112817 | 1976329 ~ 1976585 (-) | True | G33732 |
| TU45446 | lncRNA | upstream | 210823 | 2074335 ~ 2074606 (-) | True | G33759 |
| XR_002649842.1 | lncRNA | upstream | 217463 | 2080975 ~ 2083243 (-) | True | LOC111192348 |
| TU45517 | lncRNA | upstream | 264755 | 2128267 ~ 2130172 (-) | True | G33804 |
| XM_022668883.1 | mRNA | downstream | 25502 | 1825489 ~ 1837284 (-) | True | LOC103040308 |
| XM_022668882.1 | mRNA | downstream | 26310 | 1825489 ~ 1836476 (-) | False | LOC103040308 |
| XM_022668878.1 | mRNA | downstream | 109243 | 1745216 ~ 1753543 (-) | False | LOC103044468 |
| XM_007259081.3 | mRNA | upstream | 7098 | 1870610 ~ 1878209 (-) | False | cbx7 |
| XM_007259080.3 | mRNA | upstream | 7098 | 1870610 ~ 1878208 (-) | True | cbx7 |
| XM_022668889.1 | mRNA | upstream | 15746 | 1879258 ~ 1889279 (-) | True | josd1 |
| XM_007259083.3 | mRNA | upstream | 26759 | 1890271 ~ 1895993 (-) | True | LOC103046112 |
| XM_007259084.3 | mRNA | upstream | 34673 | 1898185 ~ 1904629 (-) | True | xrcc6 |
| TU45334 | other | downstream | 50164 | 1810586 ~ 1812622 (-) | True | G33675 |
| trnar-ccu | other | downstream | 736319 | 1126395 ~ 1126467 (-) | True | trnar-ccu |
| trnaq-cug | other | downstream | 737250 | 1125465 ~ 1125536 (-) | True | trnaq-cug |
| TU44782 | other | downstream | 1461474 | 389469 ~ 401312 (-) | False | LOC111192416 |
| XR_002649841.1 | other | upstream | 159229 | 2022741 ~ 2034470 (-) | False | LOC103022010 |
| TU45452 | other | upstream | 171582 | 2035094 ~ 2042274 (-) | False | LOC103022010 |
| TU45451 | other | upstream | 172613 | 2036125 ~ 2042274 (-) | False | LOC103022010 |
| TU45542 | other | upstream | 305511 | 2169023 ~ 2177059 (-) | True | G33823 |
| TU45557 | other | upstream | 331245 | 2194757 ~ 2196095 (-) | True | G33836 |
