Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45962 |
| length | 319 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G34159 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 3728642 ~ 3728960 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45895 | lncRNA | downstream | 329529 | 3391629 ~ 3399113 (-) | True | G34101 |
| XR_002649845.1 | lncRNA | downstream | 539206 | 3107202 ~ 3189436 (-) | True | LOC111192350 |
| TU45809 | lncRNA | downstream | 643236 | 3060369 ~ 3085406 (-) | True | G34036 |
| TU45696 | lncRNA | downstream | 1125453 | 2574387 ~ 2603189 (-) | True | G33944 |
| TU45697 | lncRNA | downstream | 1125453 | 2575033 ~ 2603189 (-) | False | G33944 |
| TU45973 | lncRNA | upstream | 48940 | 3777900 ~ 3781741 (-) | True | G34166 |
| TU46051 | lncRNA | upstream | 111043 | 3840003 ~ 3842727 (-) | True | G34218 |
| XR_455620.2 | lncRNA | upstream | 151622 | 3880582 ~ 3883412 (-) | True | LOC103038927 |
| TU46069 | lncRNA | upstream | 174374 | 3903334 ~ 3903569 (-) | True | G34230 |
| TU46071 | lncRNA | upstream | 181329 | 3910289 ~ 3910512 (-) | True | G34232 |
| XM_007259172.3 | mRNA | downstream | 173423 | 3545433 ~ 3555219 (-) | True | LOC103046317 |
| XM_007259173.3 | mRNA | downstream | 196253 | 3403947 ~ 3532389 (-) | True | myo1d |
| XM_007259176.3 | mRNA | downstream | 338064 | 3382775 ~ 3390578 (-) | True | LOC103047433 |
| XM_007259177.3 | mRNA | downstream | 348043 | 3340612 ~ 3380599 (-) | True | ogfod3 |
| XM_022669429.1 | mRNA | downstream | 505644 | 3221347 ~ 3222998 (-) | True | LOC111192418 |
| XM_007259167.3 | mRNA | upstream | 20211 | 3749171 ~ 3770492 (-) | True | LOC103044690 |
| XM_007259165.3 | mRNA | upstream | 41679 | 3770639 ~ 3776185 (-) | True | mrpl10 |
| XM_007259163.3 | mRNA | upstream | 54448 | 3783408 ~ 3789161 (-) | False | prr15l |
| XM_015608359.2 | mRNA | upstream | 73952 | 3802912 ~ 3807018 (-) | False | LOC103042441 |
| XM_007259159.3 | mRNA | upstream | 73952 | 3802912 ~ 3806978 (-) | True | LOC103042441 |
| TU45820 | other | downstream | 534265 | 3181168 ~ 3194377 (-) | True | G34046 |
| TU45650 | other | downstream | 1419313 | 2303262 ~ 2309329 (-) | True | G33904 |
| TU45557 | other | downstream | 1532547 | 2194757 ~ 2196095 (-) | True | G33836 |
| TU45542 | other | downstream | 1551583 | 2169023 ~ 2177059 (-) | True | G33823 |
| TU45451 | other | downstream | 1686368 | 2036125 ~ 2042274 (-) | False | LOC103022010 |
| TU45985 | other | upstream | 54165 | 3783125 ~ 3789192 (-) | True | prr15l |
| TU45987 | other | upstream | 54165 | 3783125 ~ 3789106 (-) | False | prr15l |
| TU45988 | other | upstream | 54165 | 3783125 ~ 3789064 (-) | False | prr15l |
| TU45984 | other | upstream | 54448 | 3783408 ~ 3789064 (-) | False | prr15l |
| TU45986 | other | upstream | 54448 | 3783408 ~ 3789106 (-) | False | prr15l |
