Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46077 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G34238 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 3924442 ~ 3924669 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46071 | lncRNA | downstream | 13930 | 3910289 ~ 3910512 (-) | True | G34232 |
| TU46069 | lncRNA | downstream | 20873 | 3903334 ~ 3903569 (-) | True | G34230 |
| XR_455620.2 | lncRNA | downstream | 41030 | 3880582 ~ 3883412 (-) | True | LOC103038927 |
| TU46051 | lncRNA | downstream | 81715 | 3840003 ~ 3842727 (-) | True | G34218 |
| TU45973 | lncRNA | downstream | 142701 | 3777900 ~ 3781741 (-) | True | G34166 |
| TU46079 | lncRNA | upstream | 812 | 3925481 ~ 3925690 (-) | True | G34240 |
| TU46115 | lncRNA | upstream | 78255 | 4002924 ~ 4003802 (-) | True | G34265 |
| TU46159 | lncRNA | upstream | 187712 | 4112381 ~ 4124821 (-) | True | G34298 |
| TU46160 | lncRNA | upstream | 190223 | 4114892 ~ 4124821 (-) | False | G34298 |
| TU46158 | lncRNA | upstream | 192685 | 4117354 ~ 4124821 (-) | False | G34298 |
| XM_022668927.1 | mRNA | downstream | 31077 | 3885324 ~ 3893365 (-) | False | LOC103038619 |
| XM_022668926.1 | mRNA | downstream | 31080 | 3885324 ~ 3893362 (-) | False | LOC103038619 |
| XM_022668928.1 | mRNA | downstream | 31081 | 3884272 ~ 3893361 (-) | True | LOC103038619 |
| XM_022668925.1 | mRNA | downstream | 31081 | 3885324 ~ 3893361 (-) | False | LOC103038619 |
| XM_015608330.2 | mRNA | downstream | 31090 | 3884014 ~ 3893352 (-) | False | LOC103038619 |
| XM_007259143.3 | mRNA | upstream | 163434 | 4088103 ~ 4097955 (-) | True | LOC103036928 |
| XM_007259178.3 | mRNA | upstream | 223519 | 4148188 ~ 4161856 (-) | True | LOC103021465 |
| XM_022668932.1 | mRNA | upstream | 294798 | 4219467 ~ 4440792 (-) | True | LOC103044368 |
| XM_022668933.1 | mRNA | upstream | 294798 | 4219467 ~ 4440791 (-) | False | LOC103044368 |
| XM_007259180.3 | mRNA | upstream | 667365 | 4592034 ~ 4703993 (-) | True | atrnl1 |
| TU46045 | other | downstream | 40973 | 3836621 ~ 3883469 (-) | True | G34214 |
| TU45989 | other | downstream | 135250 | 3783408 ~ 3789192 (-) | False | prr15l |
| TU45986 | other | downstream | 135336 | 3783408 ~ 3789106 (-) | False | prr15l |
| TU45988 | other | downstream | 135378 | 3783125 ~ 3789064 (-) | False | prr15l |
| XR_002649848.1 | other | upstream | 1333213 | 5257882 ~ 5362485 (-) | False | tcf7l2 |
| XR_455628.3 | other | upstream | 1983305 | 5907974 ~ 5928154 (-) | False | ccdc186 |
| TU46775 | other | upstream | 2011166 | 5935835 ~ 5939400 (-) | True | G34770 |
| TU47031 | other | upstream | 2540699 | 6465368 ~ 6513701 (-) | False | LOC103026268 |
| TU47043 | other | upstream | 2612352 | 6537021 ~ 6541364 (-) | True | G34953 |
