Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46480 |
| length | 1138 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 7 |
| gene id | LOC111192354 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 5209468 ~ 5299021 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46469 | lncRNA | upstream | 46863 | 5164666 ~ 5165607 (+) | True | G34552 |
| TU46453 | lncRNA | upstream | 65883 | 5146076 ~ 5146587 (+) | True | G34539 |
| TU46452 | lncRNA | upstream | 67285 | 5144806 ~ 5145185 (+) | True | G34538 |
| TU46451 | lncRNA | upstream | 67834 | 5144422 ~ 5144636 (+) | True | G34537 |
| TU46450 | lncRNA | upstream | 68414 | 5143748 ~ 5144056 (+) | True | G34536 |
| TU46501 | lncRNA | downstream | 126855 | 5385883 ~ 5386178 (+) | True | G34580 |
| TU46514 | lncRNA | downstream | 141927 | 5400955 ~ 5571681 (+) | True | G34587 |
| TU46543 | lncRNA | downstream | 399941 | 5658969 ~ 5659199 (+) | True | G34605 |
| TU46544 | lncRNA | downstream | 400238 | 5659266 ~ 5659902 (+) | True | G34606 |
| TU46540 | lncRNA | downstream | 433512 | 5692540 ~ 5711855 (+) | False | dnmbp |
| XM_007259208.3 | mRNA | upstream | 53773 | 5147340 ~ 5158697 (+) | False | aldh18a1 |
| XM_007259209.3 | mRNA | upstream | 53773 | 5147340 ~ 5158697 (+) | False | aldh18a1 |
| XM_007259210.3 | mRNA | upstream | 53773 | 5147341 ~ 5158697 (+) | False | aldh18a1 |
| XM_015608381.2 | mRNA | upstream | 53773 | 5147520 ~ 5158697 (+) | True | aldh18a1 |
| XM_022668936.1 | mRNA | upstream | 112767 | 5087009 ~ 5099703 (+) | True | LOC103044692 |
| XM_015608399.2 | mRNA | downstream | 314437 | 5573465 ~ 5579442 (+) | False | zdhhc6 |
| XM_007259232.3 | mRNA | downstream | 314481 | 5573509 ~ 5579442 (+) | True | zdhhc6 |
| XM_007259235.3 | mRNA | downstream | 314484 | 5573512 ~ 5579442 (+) | False | zdhhc6 |
| XM_007259243.3 | mRNA | downstream | 337053 | 5596081 ~ 5607391 (+) | True | LOC103039360 |
| XM_007259244.3 | mRNA | downstream | 337053 | 5596081 ~ 5607391 (+) | False | LOC103039360 |
| TU46176 | other | upstream | 1034387 | 4171051 ~ 4178083 (+) | False | G34309 |
| TU45414 | other | upstream | 3155596 | 2050798 ~ 2056874 (+) | True | amz2 |
| trnaq-cug_1 | other | upstream | 3374894 | 1837505 ~ 1837576 (+) | True | trnaq-cug_1 |
| TU45181 | other | upstream | 3824451 | 1369202 ~ 1388019 (+) | True | LOC111192342 |
| trnam-cau_18 | other | upstream | 4090598 | 1121801 ~ 1121872 (+) | True | trnam-cau_18 |
| XR_002649861.1 | other | downstream | 1360642 | 6619670 ~ 6663587 (+) | False | LOC103029551 |
| XR_455629.3 | other | downstream | 1360643 | 6619671 ~ 6661251 (+) | False | LOC103029551 |
| TU47021 | other | downstream | 1471926 | 6730954 ~ 6731424 (+) | True | G34931 |
| TU47135 | other | downstream | 1643389 | 6902417 ~ 6903997 (+) | True | G35021 |
| TU48089 | other | downstream | 5214346 | 10473374 ~ 10474792 (+) | False | G35744 |
