Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46673 |
| length | 609 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G34688 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 5573473 ~ 5574758 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46666 | lncRNA | downstream | 182153 | 5391095 ~ 5391320 (-) | True | G34682 |
| TU46475 | lncRNA | downstream | 379614 | 5191033 ~ 5193859 (-) | True | G34556 |
| TU46458 | lncRNA | downstream | 421060 | 5151372 ~ 5152413 (-) | True | G34543 |
| TU46460 | lncRNA | downstream | 422510 | 5150310 ~ 5150963 (-) | True | G34544 |
| TU46457 | lncRNA | downstream | 429417 | 5143724 ~ 5144056 (-) | True | G34542 |
| TU46695 | lncRNA | upstream | 70148 | 5644906 ~ 5645105 (-) | True | G34708 |
| TU46700 | lncRNA | upstream | 84266 | 5659024 ~ 5659904 (-) | True | G34713 |
| TU46707 | lncRNA | upstream | 102660 | 5677418 ~ 5681939 (-) | True | G34719 |
| TU46759 | lncRNA | upstream | 287699 | 5862457 ~ 5867932 (-) | True | G34760 |
| TU46770 | lncRNA | upstream | 312280 | 5887038 ~ 5891991 (-) | True | G34765 |
| XM_022668946.1 | mRNA | downstream | 1839 | 5400928 ~ 5571634 (-) | False | vti1a |
| XM_022668948.1 | mRNA | downstream | 1839 | 5400928 ~ 5571634 (-) | True | vti1a |
| XM_022668947.1 | mRNA | downstream | 1840 | 5400928 ~ 5571633 (-) | False | vti1a |
| XM_022668949.1 | mRNA | downstream | 1840 | 5400928 ~ 5571633 (-) | False | vti1a |
| XM_007259226.3 | mRNA | downstream | 210987 | 5260389 ~ 5362486 (-) | False | tcf7l2 |
| XM_022668952.1 | mRNA | upstream | 4572 | 5579330 ~ 5596438 (-) | False | acsl5 |
| XM_015608339.2 | mRNA | upstream | 4572 | 5579330 ~ 5596438 (-) | True | acsl5 |
| XM_022668954.1 | mRNA | upstream | 25610 | 5600368 ~ 5687159 (-) | False | tectb |
| XM_022668953.1 | mRNA | upstream | 31863 | 5606621 ~ 5687158 (-) | True | tectb |
| XM_007259249.2 | mRNA | upstream | 196861 | 5771619 ~ 5803122 (-) | True | nrap |
| XR_002649848.1 | other | downstream | 210988 | 5257882 ~ 5362485 (-) | False | tcf7l2 |
| TU46045 | other | downstream | 1690004 | 3836621 ~ 3883469 (-) | True | G34214 |
| TU45989 | other | downstream | 1784281 | 3783408 ~ 3789192 (-) | False | prr15l |
| TU45986 | other | downstream | 1784367 | 3783408 ~ 3789106 (-) | False | prr15l |
| TU45984 | other | downstream | 1784409 | 3783408 ~ 3789064 (-) | False | prr15l |
| XR_455628.3 | other | upstream | 333216 | 5907974 ~ 5928154 (-) | False | ccdc186 |
| TU46775 | other | upstream | 361077 | 5935835 ~ 5939400 (-) | True | G34770 |
| TU47031 | other | upstream | 890610 | 6465368 ~ 6513701 (-) | False | LOC103026268 |
| TU47043 | other | upstream | 962263 | 6537021 ~ 6541364 (-) | True | G34953 |
| TU47076 | other | upstream | 1044922 | 6619680 ~ 6653585 (-) | True | G34981 |
