RNA id: XM_015608363.2


Basic Information

Item Value
RNA id XM_015608363.2
length 648
RNA type mRNA
GC content 0.41
exon number 4
gene id ndufaf8
representative True

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6543144 ~ 6546582 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AATCAGCAAAGATAGTCAATTTTAGGGGGCGGGTCATACAGATGGTTGACCAATCACTGGTGTGAGAGGGCGGGCCGTTTCTTCGTCACTAACATGGTGAGCACGGGGAGTTAGCCTGCCTGTGAGCTAATGTTAATAACTCTGGGCTGTGCTGAGACTTAAAGCTGATCAGAATCATGTCAGGGACAAACCCCTGGACCCGGAGCCGAGAGAGGATGAGGCGGTTCCCCGACCTGCTGGCCCAGTGCTCCACAGAGGCAGCAGTTTATGGGAAATGTGTGGTCTCCACTACTACTGGTAAACAGGAGCTGAAGAAAGATTTATGTGTAAAAGAGTTTGAAGCCCTGAAGACCTGCTTTGTCTCTGCTGCAAAACGGGGTGTGAAGTAGATGGAGTGCACAAAGCCATTCATTGACCATCATGTtttataaacatacatttatttgtatagttacaatataaaaaacagttgCTGCCATTTTTATTTACCAGTATACATAgtgacattatttttaatatttgaataatatatGTTGGTTCAGCATATATTTGTATTGTCCTCGtgtataaaacataaatgaatTGTATGACACTTGGTTTTGTGTGAGCATGAGTAATAATAAAGAATGAATGTgaatagtaaggaaa

Function

GO: NA

KEGG:

id description
K24726 NDUFAF8; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47030 lncRNA downstream 175038 6366780 ~ 6368106 (-) False LOC103026268
TU47029 lncRNA downstream 182766 6359911 ~ 6360378 (-) True G34939
TU46866 lncRNA downstream 390283 6149230 ~ 6152861 (-) True G34829
TU46833 lncRNA downstream 490706 6049006 ~ 6052438 (-) False ablim1
TU46809 lncRNA downstream 499705 6042925 ~ 6043439 (-) True G34791
TU47088 lncRNA upstream 128997 6675579 ~ 6679954 (-) True G34987
TU47089 lncRNA upstream 133769 6680351 ~ 6680909 (-) True G34988
TU47093 lncRNA upstream 141708 6688290 ~ 6689610 (-) False LOC103030829
TU47094 lncRNA upstream 141759 6688341 ~ 6689610 (-) False LOC103030829
TU47099 lncRNA upstream 182279 6728861 ~ 6729154 (-) True G34997
XM_022669012.1 mRNA downstream 29560 6366684 ~ 6513584 (-) False LOC103026268
XM_007259297.3 mRNA downstream 65854 6366684 ~ 6477290 (-) True LOC103026268
XM_015608380.2 mRNA downstream 73161 6366684 ~ 6469983 (-) False LOC103026268
XM_007259296.3 mRNA downstream 255511 6273871 ~ 6287633 (-) True LOC103025956
XM_007259294.2 mRNA downstream 272201 6268401 ~ 6270943 (-) True birc5
XM_022669018.1 mRNA upstream 6751 6553333 ~ 6558835 (-) False LOC103027554
XM_022669017.1 mRNA upstream 6751 6553333 ~ 6557903 (-) True LOC103027554
XM_007259305.3 mRNA upstream 20807 6567389 ~ 6578059 (-) True bicral
XM_007259306.3 mRNA upstream 20807 6567389 ~ 6577759 (-) False bicral
XM_007259313.3 mRNA upstream 141585 6688167 ~ 6696291 (-) True LOC103030829
TU47043 other downstream 1780 6537021 ~ 6541364 (-) True G34953
TU47031 other downstream 29443 6465368 ~ 6513701 (-) False LOC103026268
TU46775 other downstream 603744 5935835 ~ 5939400 (-) True G34770
XR_455628.3 other downstream 614990 5907974 ~ 5928154 (-) False ccdc186
XR_002649848.1 other downstream 1180659 5257882 ~ 5362485 (-) False tcf7l2
TU47076 other upstream 73098 6619680 ~ 6653585 (-) True G34981
TU47717 other upstream 2378246 8924828 ~ 8927717 (-) True G35429
TU47824 other upstream 2657988 9204570 ~ 9205911 (-) True G35512
TU47866 other upstream 2879493 9426075 ~ 9431164 (-) False rpl38
TU47867 other upstream 2880254 9426836 ~ 9431164 (-) False rpl38

Expression Profile