Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47276 |
| length | 981 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC111192361 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 7115855 ~ 7119167 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47270 | lncRNA | upstream | 38968 | 7076688 ~ 7077157 (+) | True | G35096 |
| TU47147 | lncRNA | upstream | 65496 | 6987832 ~ 7050629 (+) | True | G35031 |
| TU47156 | lncRNA | upstream | 95322 | 7017313 ~ 7020803 (+) | True | G35037 |
| TU47150 | lncRNA | upstream | 106208 | 7005776 ~ 7009917 (+) | True | G35034 |
| TU47131 | lncRNA | upstream | 218732 | 6892505 ~ 6897393 (+) | True | G35017 |
| TU47278 | lncRNA | downstream | 6827 | 7125954 ~ 7159316 (+) | True | G35102 |
| XR_002649864.1 | lncRNA | downstream | 111126 | 7230253 ~ 7231321 (+) | True | LOC103039044 |
| TU47325 | lncRNA | downstream | 114508 | 7233635 ~ 7233863 (+) | True | G35143 |
| TU47334 | lncRNA | downstream | 202793 | 7321920 ~ 7322957 (+) | True | G35148 |
| TU47458 | lncRNA | downstream | 989033 | 8108160 ~ 8108470 (+) | True | G35244 |
| XM_007259337.3 | mRNA | upstream | 3934 | 7078789 ~ 7112191 (+) | True | acsf2 |
| XM_007259334.3 | mRNA | upstream | 47597 | 7057908 ~ 7068528 (+) | True | LOC103036712 |
| XM_015608397.2 | mRNA | upstream | 59696 | 7043482 ~ 7056429 (+) | True | slc16a5 |
| XM_007259332.3 | mRNA | upstream | 59696 | 7043483 ~ 7056429 (+) | False | slc16a5 |
| XM_007259333.3 | mRNA | upstream | 75440 | 7029131 ~ 7040685 (+) | True | kctd2 |
| XM_022669035.1 | mRNA | downstream | 156620 | 7275747 ~ 7292804 (+) | True | LOC103039861 |
| XM_007259343.3 | mRNA | downstream | 187179 | 7306306 ~ 7335081 (+) | True | LOC103040176 |
| XM_007259344.3 | mRNA | downstream | 187179 | 7306306 ~ 7335081 (+) | False | LOC103040176 |
| XM_022669036.1 | mRNA | downstream | 233959 | 7353086 ~ 7466457 (+) | True | ankfn1 |
| XM_007259346.3 | mRNA | downstream | 353780 | 7472907 ~ 7475245 (+) | True | nog |
| TU47135 | other | upstream | 212128 | 6902417 ~ 6903997 (+) | True | G35021 |
| TU47021 | other | upstream | 384701 | 6730954 ~ 6731424 (+) | True | G34931 |
| XR_002649861.1 | other | upstream | 452538 | 6619670 ~ 6663587 (+) | False | LOC103029551 |
| XR_455629.3 | other | upstream | 454874 | 6619671 ~ 6661251 (+) | False | LOC103029551 |
| TU46176 | other | upstream | 2938042 | 4171051 ~ 4178083 (+) | False | G34309 |
| TU48089 | other | downstream | 3354247 | 10473374 ~ 10474792 (+) | False | G35744 |
| TU48092 | other | downstream | 3354247 | 10473374 ~ 10475783 (+) | False | G35744 |
| TU48150 | other | downstream | 3875234 | 10994361 ~ 11001539 (+) | False | dock1 |
| TU48151 | other | downstream | 3875234 | 10994361 ~ 11001805 (+) | False | dock1 |
| TU48301 | other | downstream | 4682331 | 11801458 ~ 11802204 (+) | True | G35903 |
