Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47866 |
| length | 396 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 5 |
| gene id | rpl38 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 9426075 ~ 9431228 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47857 | lncRNA | downstream | 19863 | 9371369 ~ 9406212 (-) | True | G35538 |
| TU47851 | lncRNA | downstream | 112466 | 9310179 ~ 9313609 (-) | False | G35536 |
| TU47853 | lncRNA | downstream | 112466 | 9310179 ~ 9313609 (-) | True | G35536 |
| TU47836 | lncRNA | downstream | 151983 | 9273712 ~ 9274092 (-) | True | G35524 |
| TU47813 | lncRNA | downstream | 286092 | 9139085 ~ 9139983 (-) | True | G35501 |
| XR_002649868.1 | lncRNA | upstream | 3584 | 9434748 ~ 9437143 (-) | True | LOC111192367 |
| TU47881 | lncRNA | upstream | 22705 | 9453869 ~ 9454177 (-) | True | G35553 |
| TU47887 | lncRNA | upstream | 30039 | 9461203 ~ 9461613 (-) | True | G35559 |
| TU47943 | lncRNA | upstream | 331187 | 9762351 ~ 9762600 (-) | True | G35613 |
| TU47945 | lncRNA | upstream | 350575 | 9781739 ~ 9783008 (-) | True | G35615 |
| XM_022669069.1 | mRNA | downstream | 3364 | 9314584 ~ 9422711 (-) | True | LOC103043647 |
| XM_022669070.1 | mRNA | downstream | 3365 | 9314584 ~ 9422710 (-) | False | LOC103043647 |
| XM_022669071.1 | mRNA | downstream | 3365 | 9314584 ~ 9422710 (-) | False | LOC103043647 |
| XM_022669072.1 | mRNA | downstream | 3366 | 9314584 ~ 9422709 (-) | False | LOC103043647 |
| XM_022669061.1 | mRNA | downstream | 305655 | 9052963 ~ 9120420 (-) | True | polr3a |
| XM_015603490.2 | mRNA | upstream | 1012095 | 10443259 ~ 10450285 (-) | True | LOC103039991 |
| XM_022669075.1 | mRNA | upstream | 1036657 | 10467821 ~ 10475877 (-) | True | mrpl38 |
| XM_022669076.1 | mRNA | upstream | 1055903 | 10487067 ~ 10494186 (-) | True | wbp2 |
| XM_022669080.1 | mRNA | upstream | 1396246 | 10827410 ~ 10880834 (-) | True | fam196a |
| XM_022669077.1 | mRNA | upstream | 1396246 | 10827410 ~ 10859113 (-) | False | fam196a |
| TU47824 | other | downstream | 220164 | 9204570 ~ 9205911 (-) | True | G35512 |
| TU47717 | other | downstream | 498358 | 8924828 ~ 8927717 (-) | True | G35429 |
| TU47076 | other | downstream | 2772490 | 6619680 ~ 6653585 (-) | True | G34981 |
| TU47043 | other | downstream | 2884711 | 6537021 ~ 6541364 (-) | True | G34953 |
| TU47031 | other | downstream | 2912374 | 6465368 ~ 6513701 (-) | False | LOC103026268 |
| trnap-cgg_1 | other | upstream | 22322 | 9453486 ~ 9453557 (-) | True | trnap-cgg_1 |
| TU48252 | other | upstream | 1622495 | 11053659 ~ 11077913 (-) | False | clrn3 |
| TU48251 | other | upstream | 1641774 | 11072938 ~ 11077913 (-) | True | clrn3 |
| TU48268 | other | upstream | 1650505 | 11081669 ~ 11083146 (-) | False | clrn3 |
| TU48386 | other | upstream | 2636382 | 12067546 ~ 12072403 (-) | False | LOC103036331 |
