Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48897 |
| length | 348 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G36330 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 13836865 ~ 13841911 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48850 | lncRNA | downstream | 3695 | 13832923 ~ 13833170 (-) | True | G36300 |
| TU48826 | lncRNA | downstream | 78519 | 13678796 ~ 13758346 (-) | True | G36283 |
| TU48800 | lncRNA | downstream | 226929 | 13587786 ~ 13609936 (-) | True | G36257 |
| TU48796 | lncRNA | downstream | 263498 | 13559218 ~ 13573367 (-) | True | G36253 |
| TU48769 | lncRNA | downstream | 332815 | 13501296 ~ 13504050 (-) | True | G36236 |
| TU48899 | lncRNA | upstream | 7063 | 13848974 ~ 13849237 (-) | True | G36331 |
| TU48908 | lncRNA | upstream | 142506 | 13984417 ~ 14030941 (-) | True | G36339 |
| TU48978 | lncRNA | upstream | 710834 | 14552745 ~ 14569986 (-) | True | G36396 |
| TU49012 | lncRNA | upstream | 862632 | 14704543 ~ 14705231 (-) | True | G36417 |
| TU49028 | lncRNA | upstream | 907642 | 14749553 ~ 14778395 (-) | False | G36428 |
| XM_007260021.3 | mRNA | downstream | 322627 | 13508956 ~ 13514238 (-) | False | dnajc9 |
| XM_007260022.3 | mRNA | downstream | 322647 | 13508956 ~ 13514218 (-) | True | dnajc9 |
| XM_022669143.1 | mRNA | downstream | 336688 | 13477499 ~ 13500177 (-) | True | p4ha1 |
| XM_022669142.1 | mRNA | downstream | 336688 | 13477499 ~ 13500177 (-) | False | p4ha1 |
| XM_022669138.1 | mRNA | downstream | 415924 | 13391819 ~ 13420941 (-) | True | LOC103043889 |
| XM_022669150.1 | mRNA | upstream | 40546 | 13882457 ~ 14439229 (-) | False | grid1 |
| XM_022669149.1 | mRNA | upstream | 40546 | 13882457 ~ 14439229 (-) | True | grid1 |
| XM_022669151.1 | mRNA | upstream | 50996 | 13892907 ~ 14439229 (-) | False | grid1 |
| XM_022669155.1 | mRNA | upstream | 724027 | 14565938 ~ 14616622 (-) | False | wapl |
| XM_022669152.1 | mRNA | upstream | 724027 | 14565938 ~ 14616622 (-) | False | wapl |
| trnam-cau_20 | other | downstream | 636627 | 13200166 ~ 13200238 (-) | True | trnam-cau_20 |
| trnam-cau_19 | other | downstream | 639090 | 13197702 ~ 13197775 (-) | True | trnam-cau_19 |
| TU48566 | other | downstream | 1125320 | 12709808 ~ 12711545 (-) | True | G36074 |
| trnaq-uug | other | downstream | 1168078 | 12668716 ~ 12668787 (-) | True | trnaq-uug |
| trnaq-cug_2 | other | downstream | 1168958 | 12667836 ~ 12667907 (-) | True | trnaq-cug_2 |
| trnal-caa_1 | other | upstream | 1109726 | 14951637 ~ 14951749 (-) | True | trnal-caa_1 |
| trnal-caa_2 | other | upstream | 1109930 | 14951841 ~ 14951953 (-) | True | trnal-caa_2 |
| trnal-caa_3 | other | upstream | 1110193 | 14952104 ~ 14952216 (-) | True | trnal-caa_3 |
| trnal-caa_4 | other | upstream | 1110397 | 14952308 ~ 14952420 (-) | True | trnal-caa_4 |
| trnal-caa_5 | other | upstream | 1110601 | 14952512 ~ 14952624 (-) | True | trnal-caa_5 |
