Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49176 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G36550 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 15199822 ~ 15200037 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49167 | lncRNA | downstream | 50466 | 15148403 ~ 15149356 (-) | True | G36542 |
| TU49087 | lncRNA | downstream | 322744 | 14832969 ~ 14877078 (-) | True | G36477 |
| TU49046 | lncRNA | downstream | 413069 | 14786037 ~ 14786753 (-) | False | c4h10orf88 |
| TU49028 | lncRNA | downstream | 421427 | 14749553 ~ 14778395 (-) | False | G36428 |
| TU49027 | lncRNA | downstream | 421427 | 14774681 ~ 14778395 (-) | True | G36428 |
| TU49335 | lncRNA | upstream | 182475 | 15382512 ~ 15454810 (-) | True | G36632 |
| TU49314 | lncRNA | upstream | 192974 | 15393011 ~ 15397037 (-) | True | G36629 |
| TU49337 | lncRNA | upstream | 207423 | 15407460 ~ 15412008 (-) | True | G36634 |
| TU49355 | lncRNA | upstream | 314821 | 15514858 ~ 15527219 (-) | False | LOC111192377 |
| TU49356 | lncRNA | upstream | 314821 | 15514858 ~ 15526474 (-) | True | LOC111192377 |
| XM_022669170.1 | mRNA | downstream | 84710 | 15094604 ~ 15115112 (-) | True | LOC103031644 |
| XM_022669171.1 | mRNA | downstream | 88732 | 15094604 ~ 15111090 (-) | False | LOC103031644 |
| XM_022669169.1 | mRNA | downstream | 114800 | 15040534 ~ 15085022 (-) | True | med24 |
| XM_022669166.1 | mRNA | downstream | 338039 | 14834452 ~ 14861783 (-) | True | c4h16orf62 |
| XM_007260030.3 | mRNA | downstream | 402610 | 14785952 ~ 14797212 (-) | True | c4h10orf88 |
| XM_007255143.3 | mRNA | upstream | 341063 | 15541100 ~ 15547570 (-) | True | psmc5 |
| XM_022669178.1 | mRNA | upstream | 352554 | 15552591 ~ 15565917 (-) | True | smarcd2 |
| XM_007255140.3 | mRNA | upstream | 372743 | 15572780 ~ 15580758 (-) | True | LOC103026640 |
| XM_022669179.1 | mRNA | upstream | 382588 | 15582625 ~ 15611422 (-) | True | LOC103026344 |
| XM_007255139.3 | mRNA | upstream | 382588 | 15582625 ~ 15607667 (-) | False | LOC103026344 |
| trnal-caa_19 | other | downstream | 243065 | 14956645 ~ 14956757 (-) | True | trnal-caa_19 |
| trnal-caa_18 | other | downstream | 243472 | 14956238 ~ 14956350 (-) | True | trnal-caa_18 |
| trnal-caa_17 | other | downstream | 243878 | 14955832 ~ 14955944 (-) | True | trnal-caa_17 |
| trnal-caa_16 | other | downstream | 244284 | 14955426 ~ 14955538 (-) | True | trnal-caa_16 |
| trnal-cag_9 | other | downstream | 244485 | 14955227 ~ 14955337 (-) | True | trnal-cag_9 |
| TU49397 | other | upstream | 555576 | 15755613 ~ 15769529 (-) | False | G36677 |
| TU49409 | other | upstream | 555576 | 15755613 ~ 15769491 (-) | False | G36677 |
| TU49415 | other | upstream | 555576 | 15755613 ~ 15769529 (-) | False | G36677 |
| XR_002649883.1 | other | upstream | 558353 | 15758390 ~ 15758863 (-) | True | LOC111192378 |
| TU49443 | other | upstream | 637068 | 15837105 ~ 15840485 (-) | False | LOC103023526 |
