Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49868 |
| length | 367 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G37001 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 17224041 ~ 17224407 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49867 | lncRNA | upstream | 341 | 17223335 ~ 17223700 (+) | True | G37000 |
| TU49865 | lncRNA | upstream | 1166 | 17222400 ~ 17222875 (+) | True | G36998 |
| TU49840 | lncRNA | upstream | 51416 | 17172425 ~ 17172625 (+) | True | G36983 |
| TU49839 | lncRNA | upstream | 54185 | 17169351 ~ 17169856 (+) | True | G36982 |
| TU49838 | lncRNA | upstream | 56891 | 17166909 ~ 17167150 (+) | True | G36981 |
| TU49887 | lncRNA | downstream | 48954 | 17273361 ~ 17276021 (+) | False | LOC103027613 |
| TU49896 | lncRNA | downstream | 73072 | 17297479 ~ 17340881 (+) | False | tnrc6b |
| TU49957 | lncRNA | downstream | 243550 | 17467957 ~ 17468321 (+) | True | G37055 |
| TU49958 | lncRNA | downstream | 244073 | 17468480 ~ 17468772 (+) | True | G37056 |
| TU49960 | lncRNA | downstream | 245917 | 17470324 ~ 17470774 (+) | True | G37058 |
| XM_007251273.3 | mRNA | upstream | 19778 | 17201498 ~ 17204263 (+) | False | phf5a |
| XM_007251278.3 | mRNA | upstream | 74693 | 17132606 ~ 17149348 (+) | False | LOC103030465 |
| XM_007251276.3 | mRNA | upstream | 74693 | 17132607 ~ 17149348 (+) | True | LOC103030465 |
| XM_007251277.3 | mRNA | upstream | 74693 | 17132611 ~ 17149348 (+) | False | LOC103030465 |
| XM_015606307.2 | mRNA | upstream | 92328 | 17125320 ~ 17131713 (+) | False | LOC103032149 |
| XM_015606315.2 | mRNA | downstream | 8413 | 17232820 ~ 17234559 (+) | True | cby1 |
| XM_015606314.2 | mRNA | downstream | 13017 | 17237424 ~ 17240632 (+) | True | slc16a8 |
| XM_007251267.3 | mRNA | downstream | 17287 | 17241694 ~ 17247513 (+) | True | LOC103027934 |
| XM_007251266.3 | mRNA | downstream | 26574 | 17250981 ~ 17273867 (+) | True | LOC103027613 |
| XM_022669217.1 | mRNA | downstream | 102169 | 17326576 ~ 17340892 (+) | False | tnrc6b |
| TU49795 | other | upstream | 19008 | 17201497 ~ 17205033 (+) | True | phf5a |
| TU49796 | other | upstream | 205157 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49797 | other | upstream | 205157 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49799 | other | upstream | 205157 | 17002440 ~ 17018884 (+) | False | sun1 |
| TU49230 | other | upstream | 1783888 | 15432831 ~ 15440153 (+) | False | LOC103028998 |
| TU49869 | other | downstream | 8472 | 17232879 ~ 17234550 (+) | False | cby1 |
| TU49885 | other | downstream | 55254 | 17279661 ~ 17282231 (+) | False | LOC103027613 |
| TU49999 | other | downstream | 481299 | 17705706 ~ 17708597 (+) | False | LOC103045739 |
| TU50007 | other | downstream | 490722 | 17715129 ~ 17715992 (+) | True | G37098 |
| TU50008 | other | downstream | 493824 | 17718231 ~ 17719376 (+) | True | G37099 |
