Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49960 |
| length | 451 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G37058 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 17470324 ~ 17470774 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49958 | lncRNA | upstream | 1552 | 17468480 ~ 17468772 (+) | True | G37056 |
| TU49957 | lncRNA | upstream | 2003 | 17467957 ~ 17468321 (+) | True | G37055 |
| TU49896 | lncRNA | upstream | 129443 | 17297479 ~ 17340881 (+) | False | tnrc6b |
| TU49887 | lncRNA | upstream | 194303 | 17273361 ~ 17276021 (+) | False | LOC103027613 |
| TU49868 | lncRNA | upstream | 245917 | 17224041 ~ 17224407 (+) | True | G37001 |
| TU49962 | lncRNA | downstream | 4644 | 17475418 ~ 17475771 (+) | True | G37060 |
| TU49968 | lncRNA | downstream | 38643 | 17509417 ~ 17509619 (+) | True | G37066 |
| TU49972 | lncRNA | downstream | 39193 | 17509967 ~ 17510744 (+) | False | G37068 |
| TU49973 | lncRNA | downstream | 39193 | 17509967 ~ 17517589 (+) | True | G37068 |
| TU50001 | lncRNA | downstream | 213938 | 17684712 ~ 17709836 (+) | True | G37092 |
| XM_022669438.1 | mRNA | upstream | 46130 | 17423685 ~ 17424194 (+) | True | LOC111188179 |
| XM_022669225.1 | mRNA | upstream | 60390 | 17397153 ~ 17409934 (+) | True | LOC103022777 |
| XM_007251248.3 | mRNA | upstream | 74267 | 17391730 ~ 17396057 (+) | True | dmc1 |
| XM_022669226.1 | mRNA | upstream | 74267 | 17392006 ~ 17396057 (+) | False | dmc1 |
| XM_007251249.3 | mRNA | upstream | 79899 | 17385894 ~ 17390425 (+) | True | tomm22 |
| XM_015603207.2 | mRNA | downstream | 13145 | 17483919 ~ 17491064 (+) | False | tmem101 |
| XM_007239751.3 | mRNA | downstream | 13166 | 17483940 ~ 17491064 (+) | True | tmem101 |
| XM_007239746.3 | mRNA | downstream | 50723 | 17521497 ~ 17534277 (+) | True | g6pc3 |
| XM_007239745.3 | mRNA | downstream | 50725 | 17521499 ~ 17530798 (+) | False | g6pc3 |
| XM_007248680.3 | mRNA | downstream | 234905 | 17705679 ~ 17708594 (+) | True | LOC103045739 |
| TU49885 | other | upstream | 188093 | 17279661 ~ 17282231 (+) | False | LOC103027613 |
| TU49869 | other | upstream | 235774 | 17232879 ~ 17234550 (+) | False | cby1 |
| TU49795 | other | upstream | 265291 | 17201497 ~ 17205033 (+) | True | phf5a |
| TU49797 | other | upstream | 451440 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49999 | other | downstream | 234932 | 17705706 ~ 17708597 (+) | False | LOC103045739 |
| TU50007 | other | downstream | 244355 | 17715129 ~ 17715992 (+) | True | G37098 |
| TU50008 | other | downstream | 247457 | 17718231 ~ 17719376 (+) | True | G37099 |
| TU50046 | other | downstream | 387143 | 17857917 ~ 17863066 (+) | True | G37131 |
| TU50069 | other | downstream | 481806 | 17952580 ~ 17960304 (+) | True | G37152 |
