Item | Value |
---|---|
RNA id | TU51380 |
length | 450 |
lncRNA type | inter_gene |
GC content | 0.65 |
exon number | 3 |
gene id | G38093 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035900.1 |
NCBI id | CM008303.1 |
chromosome length | 25652880 |
location | 21131630 ~ 21139901 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU51377 | lncRNA | upstream | 2889 | 21118229 ~ 21128741 (+) | False | lgi1 |
TU51365 | lncRNA | upstream | 47982 | 21044512 ~ 21083648 (+) | False | G38081 |
TU51364 | lncRNA | upstream | 83526 | 21044512 ~ 21048104 (+) | False | G38081 |
TU51366 | lncRNA | upstream | 83526 | 21044512 ~ 21048104 (+) | False | G38081 |
TU51362 | lncRNA | upstream | 83526 | 21044544 ~ 21048104 (+) | True | G38081 |
TU51389 | lncRNA | downstream | 132231 | 21272132 ~ 21272572 (+) | True | G38101 |
TU51397 | lncRNA | downstream | 177202 | 21317103 ~ 21317345 (+) | True | G38106 |
TU51387 | lncRNA | downstream | 181938 | 21321839 ~ 21322611 (+) | True | G38099 |
TU51413 | lncRNA | downstream | 219238 | 21359139 ~ 21359560 (+) | True | G38117 |
TU51418 | lncRNA | downstream | 224460 | 21364361 ~ 21369269 (+) | True | G38120 |
XM_022669334.1 | mRNA | upstream | 2866 | 21109080 ~ 21128764 (+) | True | lgi1 |
XM_022669333.1 | mRNA | upstream | 53729 | 21055568 ~ 21077901 (+) | True | pde6c |
XM_007232861.3 | mRNA | upstream | 87740 | 21031902 ~ 21043890 (+) | True | cep55 |
XM_007232859.3 | mRNA | upstream | 129619 | 20998115 ~ 21002011 (+) | True | emc9 |
XM_007232858.3 | mRNA | upstream | 134973 | 20990981 ~ 20996657 (+) | True | LOC103033426 |
XM_022669335.1 | mRNA | downstream | 2685 | 21142586 ~ 21144194 (+) | True | slc35g1 |
XM_022669336.1 | mRNA | downstream | 26667 | 21166568 ~ 21296823 (+) | True | plce1 |
XM_022669337.1 | mRNA | downstream | 26667 | 21166568 ~ 21296823 (+) | False | plce1 |
XM_022669338.1 | mRNA | downstream | 99179 | 21239080 ~ 21296823 (+) | False | plce1 |
XM_007231471.2 | mRNA | downstream | 212290 | 21352191 ~ 21352892 (+) | True | LOC103044640 |
TU51357 | other | upstream | 100833 | 21019169 ~ 21030797 (+) | True | G38079 |
TU51173 | other | upstream | 973291 | 20157880 ~ 20158339 (+) | False | G37943 |
TU51016 | other | upstream | 1646715 | 19481056 ~ 19484915 (+) | True | G37812 |
TU50913 | other | upstream | 1799969 | 19329368 ~ 19331661 (+) | True | G37749 |
trnag-ccc | other | upstream | 2234258 | 18897302 ~ 18897372 (+) | True | trnag-ccc |
XR_002649894.1 | other | downstream | 26667 | 21166568 ~ 21295290 (+) | False | plce1 |
trnar-ccu_1 | other | downstream | 2607568 | 23747469 ~ 23747541 (+) | True | trnar-ccu_1 |
trnar-ccu_2 | other | downstream | 2607670 | 23747571 ~ 23747643 (+) | True | trnar-ccu_2 |
trnar-ccu_3 | other | downstream | 2607772 | 23747673 ~ 23747745 (+) | True | trnar-ccu_3 |
trnar-ccu_4 | other | downstream | 2607874 | 23747775 ~ 23747847 (+) | True | trnar-ccu_4 |