Item | Value |
---|---|
RNA id | TU51397 |
length | 200 |
lncRNA type | inter_gene |
GC content | 0.40 |
exon number | 2 |
gene id | G38106 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035900.1 |
NCBI id | CM008303.1 |
chromosome length | 25652880 |
location | 21317103 ~ 21317345 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU51389 | lncRNA | upstream | 44531 | 21272132 ~ 21272572 (+) | True | G38101 |
TU51380 | lncRNA | upstream | 177202 | 21131630 ~ 21139901 (+) | True | G38093 |
TU51377 | lncRNA | upstream | 188362 | 21118229 ~ 21128741 (+) | False | lgi1 |
TU51365 | lncRNA | upstream | 233455 | 21044512 ~ 21083648 (+) | False | G38081 |
TU51387 | lncRNA | downstream | 4494 | 21321839 ~ 21322611 (+) | True | G38099 |
TU51413 | lncRNA | downstream | 41794 | 21359139 ~ 21359560 (+) | True | G38117 |
TU51418 | lncRNA | downstream | 47016 | 21364361 ~ 21369269 (+) | True | G38120 |
TU51451 | lncRNA | downstream | 257517 | 21574862 ~ 21620560 (+) | True | G38152 |
TU51455 | lncRNA | downstream | 266113 | 21583458 ~ 21608327 (+) | True | G38155 |
XM_022669336.1 | mRNA | upstream | 20280 | 21166568 ~ 21296823 (+) | True | plce1 |
XM_022669337.1 | mRNA | upstream | 20280 | 21166568 ~ 21296823 (+) | False | plce1 |
XM_022669338.1 | mRNA | upstream | 20280 | 21239080 ~ 21296823 (+) | False | plce1 |
XM_022669335.1 | mRNA | upstream | 172909 | 21142586 ~ 21144194 (+) | True | slc35g1 |
XM_022669334.1 | mRNA | upstream | 188339 | 21109080 ~ 21128764 (+) | True | lgi1 |
XM_007231471.2 | mRNA | downstream | 34846 | 21352191 ~ 21352892 (+) | True | LOC103044640 |
XM_022669341.1 | mRNA | downstream | 113127 | 21430472 ~ 21474118 (+) | True | ace |
XM_022669342.1 | mRNA | downstream | 135878 | 21453223 ~ 21474118 (+) | False | ace |
XM_007241520.3 | mRNA | downstream | 308256 | 21625601 ~ 21629176 (+) | True | dlx3 |
XM_022669348.1 | mRNA | downstream | 507034 | 21824379 ~ 21828127 (+) | True | LOC111192390 |
XR_002649894.1 | other | upstream | 21813 | 21166568 ~ 21295290 (+) | False | plce1 |
TU51357 | other | upstream | 286306 | 21019169 ~ 21030797 (+) | True | G38079 |
TU51173 | other | upstream | 1158764 | 20157880 ~ 20158339 (+) | False | G37943 |
TU51016 | other | upstream | 1832188 | 19481056 ~ 19484915 (+) | True | G37812 |
TU50913 | other | upstream | 1985442 | 19329368 ~ 19331661 (+) | True | G37749 |
trnar-ccu_1 | other | downstream | 2430124 | 23747469 ~ 23747541 (+) | True | trnar-ccu_1 |
trnar-ccu_2 | other | downstream | 2430226 | 23747571 ~ 23747643 (+) | True | trnar-ccu_2 |
trnar-ccu_3 | other | downstream | 2430328 | 23747673 ~ 23747745 (+) | True | trnar-ccu_3 |
trnar-ccu_4 | other | downstream | 2430430 | 23747775 ~ 23747847 (+) | True | trnar-ccu_4 |
trnar-ccu_5 | other | downstream | 2430532 | 23747877 ~ 23747949 (+) | True | trnar-ccu_5 |