Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51698 |
| length | 923 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G38330 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 22013499 ~ 22016473 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51691 | lncRNA | upstream | 446 | 21934281 ~ 22013053 (+) | True | G38325 |
| TU51686 | lncRNA | upstream | 76426 | 21909061 ~ 21937073 (+) | True | G38324 |
| TU51673 | lncRNA | upstream | 130593 | 21881436 ~ 21882906 (+) | True | G38314 |
| TU51668 | lncRNA | upstream | 141963 | 21870422 ~ 21871536 (+) | True | G38310 |
| TU51658 | lncRNA | upstream | 172221 | 21828150 ~ 21841278 (+) | True | G38306 |
| TU51764 | lncRNA | downstream | 36886 | 22053359 ~ 22053669 (+) | True | G38375 |
| TU51790 | lncRNA | downstream | 235676 | 22252149 ~ 22252642 (+) | True | G38391 |
| TU51791 | lncRNA | downstream | 262481 | 22278954 ~ 22327073 (+) | True | G38392 |
| TU51774 | lncRNA | downstream | 337036 | 22353509 ~ 22354614 (+) | True | G38379 |
| TU51847 | lncRNA | downstream | 393918 | 22410391 ~ 22410651 (+) | True | G38438 |
| XM_015601491.2 | mRNA | upstream | 1694 | 21987804 ~ 22011805 (+) | True | LOC103021762 |
| XM_022669446.1 | mRNA | upstream | 29215 | 21959447 ~ 21984284 (+) | True | LOC103023313 |
| XM_022669351.1 | mRNA | upstream | 62822 | 21938629 ~ 21950677 (+) | True | sgms1 |
| XM_007233994.3 | mRNA | upstream | 135286 | 21873312 ~ 21878213 (+) | True | g6pc |
| XM_022669347.1 | mRNA | upstream | 162518 | 21843965 ~ 21850981 (+) | True | ptges3l |
| XM_022669448.1 | mRNA | downstream | 53774 | 22070247 ~ 22097898 (+) | True | LOC111192422 |
| XM_022669352.1 | mRNA | downstream | 81278 | 22097751 ~ 22350082 (+) | True | prkg1 |
| XM_007233996.3 | mRNA | downstream | 352303 | 22368776 ~ 22371487 (+) | True | dkk1 |
| XM_022669358.1 | mRNA | downstream | 982206 | 22998679 ~ 23000623 (+) | False | LOC111192392 |
| XM_022669357.1 | mRNA | downstream | 982394 | 22998867 ~ 23000623 (+) | True | LOC111192392 |
| XR_002649894.1 | other | upstream | 718209 | 21166568 ~ 21295290 (+) | False | plce1 |
| TU51357 | other | upstream | 982702 | 21019169 ~ 21030797 (+) | True | G38079 |
| TU51173 | other | upstream | 1855160 | 20157880 ~ 20158339 (+) | False | G37943 |
| TU51016 | other | upstream | 2528584 | 19481056 ~ 19484915 (+) | True | G37812 |
| TU50913 | other | upstream | 2681838 | 19329368 ~ 19331661 (+) | True | G37749 |
| trnar-ccu_1 | other | downstream | 1730996 | 23747469 ~ 23747541 (+) | True | trnar-ccu_1 |
| trnar-ccu_2 | other | downstream | 1731098 | 23747571 ~ 23747643 (+) | True | trnar-ccu_2 |
| trnar-ccu_3 | other | downstream | 1731200 | 23747673 ~ 23747745 (+) | True | trnar-ccu_3 |
| trnar-ccu_4 | other | downstream | 1731302 | 23747775 ~ 23747847 (+) | True | trnar-ccu_4 |
| trnar-ccu_5 | other | downstream | 1731404 | 23747877 ~ 23747949 (+) | True | trnar-ccu_5 |
