RNA id: XM_007251250.3


Basic Information

Item Value
RNA id XM_007251250.3
length 4524
RNA type mRNA
GC content 0.43
exon number 10
gene id tmem184b
representative True

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17358723 ~ 17374122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gttcagttatAATCCTCTCAGTGTCTGTCGGGCTGCGCTGTGTTGCTGCTGGTGAAGCGGCTGCTGGGAGAGTAGAGTTACTTACAGACGGGAAGTTTCTCCGGTTTTTCTACGGGACTTTCTGAGGGTAGAGCGGGTCTGAGCTTCTCTGAGAGGACGCTGTTTTTCCTAATGGCGGAGAGGAAAGCTGCTGTAAATCCTACGCTGCTCGGAGAAAGGAGGGTAAATAAACCCGCGGCCATGACGGAGAGGATTTAGGGCCCGAGCCGCTtcgtctgctgctgctgctgctgtccccTTCCTCCAGAGCCGCTGCGCCGCTTTCTTCACACACAGCGTTACTGAGCCTGATGTACCGGCTGTGGAGACGTGACGTACCGTTGCCAGAACGCTTTGGGGAAGACTCAGTGGCCGCGATGGCTCCAGGATCTCCAGCCACGGCGGCCCCTGCTGGCCCAAACATTTCCTGGCTGCCCGAGGTTCCACTGCTCACCCCCGAGCGCCCCATCTTCATCATGACCACCACGGCTCAGGCTCTTGCTGGATTCTTCGTGTGGACGGCTCTGCTGCTCACCTGCCACCAGaTCTACATGCACTTGCGTTTCTACCGTTCTCCTAATGAGCAGCGACATATCGTACGCATCCTCTTCATCGTGCCCATCTATGCCTTTGACTCGTGGCTCAGCCTGCTTTTCTTCACTAATGATCAGTACTACGTCTACTTTGACACAGTGAGGGACTGCTATGAAGCATTTGTGATCTATAACTTCCTGAGCCTTTGTTACGAGTATCTGGGAGGTGAAAGTGCCATCATGGCAGAGATCAGAGGGAAGCCTATTGAGTCCAGCTGTATATATGGGACTTGCTGTCTCTGGGGCAAGACGTATTCCATTGGCTTCCTCAGATTCTGCAAACAGGCCACGCTACAATTCTGTGTGGTGAAACCTCTGATGGCTGCGATCACCGTCATCCTGCAGGCCTTTGGGAAGTATCGTGATGGAGACTTCAATGTGGCCAGTGGTTACCTCTATGTGACCATCATCTACAACATCTCAGTCAGTCTGTCGCTCTACGCTCTCTTCCTCTTCTACTTCGCTACCCGAGACCTGCTAAGCCCCTACAGCCCCATGCTGAAGTTCTTAATGGTCAAATCGGTCATCTTCCTCTCCTTCTGGCAGGGTATGCTGCTGGCTATCCTGGAGAAGTGTGGTGCCATTCCTCAGATCAGCTCTGCAGAGGTGTCTGTTGGCGAGGGCACTGTGGCGGCAGGCTATCAGAACTTCATCATCTGCATTGAGATGTTCTTTGCTGCTCTGGCACTGCGCCATGCCTTCACATTTACAGTCTACATGGACAAGAGGCTGGACTCTCAGGGCCCTGTTCCAATATATGGACAGTACGGGCGATCGGCCCCCATGAAAAGCATCTCCAGCAGCCTGAAGGAGACCATGAACCCTGGGGACATGGTGCAGGACGCCATCCACAACTTCTCCCCAGCCTATCAGCAATACACCCAGCAGTCCACTCTGGAACAGGGCACCACAGCACCACCGGTCTCTCGCAGTCACAGCTGCGTCAGCGCCAGGGACAATGAGAAAACCCTGCTGCTCAGCTCAGACGATGAGTTTTAACTCAGTACAGTAGTCTCCTTCTTCAGTGTCCCAGTCCACGTAGAGGTGCTCTTTTTCACGATGTCTCTAGGAACAGGTTCTGCAGTGGCTTCATGTACTGATGGTGTGAGTACAGCTGATTTCTCTTAGGgacacatcatcatcattacagGACCATATGGCAACTAAACAATCCAAGGATTTATATGTTTAAAGCTGGTAGAAGAGTATTAGGATTACTGCTGCTTATTGTTTCATTATTACTCATGATGAAACAACAAAGACTTTAGTGAACGCCTTTTGGTACGCAATGGTCTGCCTTGCTTGCTtcgagaaataataaaaaaatatttaaagtgtttagaaCCTGATCACAGTTAAGTTTCAGTAGTTAAGCGACTGTATTTAGACAGTTTAAGAAGTGGTCATGAGCATTTGAGCACATTTATACTTGAAATGAGGTGACTTTGGGTGGGTTTTCCAGGTTGtgagaataaaaaagtaatttttgaaCTCCAGGAATGTTGCTAACTGTTAAATAcgtgtaggcctgtcacaataactccAAAAAAGGATTgggataaacaatattattgtctttTTAAGACAGTTATGCCTCTGGCATAATGATAATGCAATTACACTCTTTCATAGAGCAATTCACTTTTGATATTTAAGGATATTAAGTCATTGCATTTAGATTAAATATAGGTTTTGGCATATAAGAGGTTGGTATACTGGCTCATGCACATAAACATTTCACATAGAAACTCTTTACATGtattatataaacataatagaaaatacatttataacatgtttataacATTATCATTGTGATGGGCCTAaacatgttgttgttgttttttttttttcttttaatttatttttaatattttttgaagaGGAGGATTTGCCTCTGATGTTTTCCAAGTTGAAGCTCCGCCCTGCATAAGATTGACAgctttgttttacagtgttccCAGACGTGGTGTAAAGGGACAGAGCGAGGGAATGTGCTGATCTGTGGCAGCTGTCTGGAGTACATTGTTGTcattctttttgtgtttttttttgttttgtttttttccgaTTGATGCACAGGGAGCCGAGTAGAGGAGCAGTTGATGGGACTTGATGAGATTACAGATTAAGAGAAATCTGCTCTTGGCTTGGCTGAAGGGGGCGAGTGCTCAGCAGACTGGATTATAAGGGCGTAATTGGGGCGTTATTTTGCGCCGTGGAGATTAGCACAGGCTTTCGTCAATATGTCAGACAGGAGACCACTGCAGTAAAACCCACTATCTGGGTTAGCTGCGTGGGTGAAATAAAATCTAGGTTATAGATGCGCGTGGAGTGGTCAGGGGCGTACTTAATGCTGCTAATATTCAAAGCAGAATCGTCAACAAAGACCCAGATGTTTCACAGTGAGgtgaaacatataaaacatataagatGATGCTGTAAAAAATtctttgttttatagttttgtctttgtatttttttgcttttacgttTTAATGCTTATTAAGGCAGCAGGTATgttataaatttaattattataaatgaatagGTTTACAATAGGTTCTTTAGGCTTGTTGTTTCTTGATAGCCAATAGAGGGCAGCATCTTGTACGTTTACGTCATTCACATGGGGACAGCTCCACCTTATCTCAGAAGGACACAGCAGCTGCTGCGTGTGTTTCAGTGGGAGGCTCACATTGATATTTCCTTCATGTTCGCTGTCGTTTTCTCTTTGATAGCACTAGAGCCTTACTGACTAGTCAGGGTCTGACCTGTGGGCTTTGATAGGTCTTTAGTATATCTAGTATATCAGGCAGCTTTGGAGTATTTAGTGCAATAGAGGCCAGTATACATGATCTAGCTGCATCAGCAGGCAAGTACAAACATTTATGGTACCtgcttttagttttagtttttggcgtgtgattatatatatttttatgactatttttgcaaatatttatCACTAGTGCACTAAAGGGGCTATTCTCCACATTCAGAAAATAGTGTCAggcctttttttgttgtttttcctttaaaaagatAAGAAAGCTAATCCCTCATTTATTCTGAACAGTttttagagagtgagagaaacacAATGTTCACACTACAGAATATAATAAAGACAATTAGGGGTGTACTCTCACTATGTTGGCTTGTTTTGTACCATGCCCGGGCACAAGTGCTtgggcttaatccctgtcttgTAAAACTGCCTCAatatgcctgtttttttttttttttatcaacaacaataatataataataattcattgtgCCTAATTTGaaactgcaaaacaaacaaTTGCAGTATACCTTGGCTCCTACTAATAATCATCTTCTTTGGTTAAATTATTAATGGATAAACACCACAACCGGATTATTTACAAAGCCCTGTCCCCtccttattttacttttttctctctttctatgaaAATATGATGCAAGTCTTCTTAAATTAATACACATGCACAGATTTGGCGGACAGTGCagactgtatttattttgtggTTTATTTGGAGTCTATTATGAAACGGCGGCATGGTTGGTGACGATGACAGTAGATTCATACCGTTCCAAAGTCCAACCCAACTGTTCTTGGCCCACATCTGTAAGCAGGCCTGGGCAAAGTTTACTCTACTGAGCTCACTCTAGCGAAACAAACTGGGCTTTTGATTGGGAGCCTGCTCGCTCATGGTACGTAATTCATAGTGTGAGTAAACCCATAGAGACAGCATTAAAAGATGGGGATCAAGTAAATgctaaattgttatttttacattttttaaaaagctgttgtATATTTTTCCTTCAAAGATTGTGCTTCTATTTTTCCTTGTGATGTTGCAACAAAGCTCTAGAACAATAAACAAGAATTTTGTCTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49896 lncRNA upstream 17842 17297479 ~ 17340881 (+) False tnrc6b
TU49887 lncRNA upstream 82702 17273361 ~ 17276021 (+) False LOC103027613
TU49868 lncRNA upstream 134316 17224041 ~ 17224407 (+) True G37001
TU49867 lncRNA upstream 135023 17223335 ~ 17223700 (+) True G37000
TU49865 lncRNA upstream 135848 17222400 ~ 17222875 (+) True G36998
TU49957 lncRNA downstream 93835 17467957 ~ 17468321 (+) True G37055
TU49958 lncRNA downstream 94358 17468480 ~ 17468772 (+) True G37056
TU49960 lncRNA downstream 96202 17470324 ~ 17470774 (+) True G37058
TU49962 lncRNA downstream 101296 17475418 ~ 17475771 (+) True G37060
TU49968 lncRNA downstream 135295 17509417 ~ 17509619 (+) True G37066
XM_007251255.3 mRNA upstream 130 17343937 ~ 17358593 (+) True LOC103024972
XM_022669217.1 mRNA upstream 17831 17326576 ~ 17340892 (+) False tnrc6b
XM_007251249.3 mRNA downstream 11772 17385894 ~ 17390425 (+) True tomm22
XM_007251248.3 mRNA downstream 17608 17391730 ~ 17396057 (+) True dmc1
XM_022669226.1 mRNA downstream 17884 17392006 ~ 17396057 (+) False dmc1
XM_022669225.1 mRNA downstream 23031 17397153 ~ 17409934 (+) True LOC103022777
XM_022669438.1 mRNA downstream 49563 17423685 ~ 17424194 (+) True LOC111188179
TU49885 other upstream 76492 17279661 ~ 17282231 (+) False LOC103027613
TU49869 other upstream 124173 17232879 ~ 17234550 (+) False cby1
TU49795 other upstream 153690 17201497 ~ 17205033 (+) True phf5a
TU49797 other upstream 339839 17000382 ~ 17018884 (+) False sun1
TU49999 other downstream 331584 17705706 ~ 17708597 (+) False LOC103045739
TU50007 other downstream 341007 17715129 ~ 17715992 (+) True G37098
TU50008 other downstream 344109 17718231 ~ 17719376 (+) True G37099
TU50046 other downstream 483795 17857917 ~ 17863066 (+) True G37131
TU50069 other downstream 578458 17952580 ~ 17960304 (+) True G37152

Expression Profile